| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0525 |
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| Symbol | |
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| ID | 4278658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 597251 |
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| End bp | 600922 |
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| Gene Length | 3672 bp |
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| Protein Length | 1223 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133283 |
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| Product | hypothetical protein |
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| Protein accession | YP_749224 |
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| Protein GI | 114561711 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.531602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCGAAC TGTTATTAAA TGGTCACACT AATATTTGTG GTACCAATGC CTCTGGTAAA
ACAACCTTAC AACGGTTAGT GCCGGTATTT TATGGCGAGT ACCCTAGCCG TGTTGTGCCG
TCAACGCGTG ACAGTTTCGA ACGTTGGTAT TTACCCCATG ACTCAAGCTA CATTATCTAT
GAATATCAAA AAGATGATGG TTTACTTTAT CAAGCGGTTT TAGCATCAGC GGGTGACGGT
AAAGGGGTAA ATTACCGCTT TATTGGCCGT GCTTTTGAGT TAGAGCATTA TATTAAGTCG
CGTAATGGCG ACACCATCAT TTGTCATTCA ATGGCAGGGT TGGGCCGTGA AGTAAAACGT
GATGGCGTAG CCCATACAAA CTTGTTAAAC ACTCGCGAGT TTCGAGCGAT CATCCAGAAC
GATCGTAGCT TATTAAATAC CGGCAGTAAC CGCAATGAGC TGCGGACTTA CGCGCGTCAG
TTCTCGTTGT GTGACGGCGA ACATAGCTTG CGTCATATCG AAAAACTCGC TAAAGCCGTG
CACTCGAAAG AGGGCAAAAT GGAAACGGTT AAATCAATGA TCGCGGCCAT TTTAGAAGAA
GATGGGGTAA ACCCACCGAC GTCTAGACTG AATCCACAAC GAGTAGAAAC GTGGATCCGT
GAAAGTCAGC TGGTGCAAGG TTTTGAACAA ATCCGCCCCG AATACGAAAA GCTCGAACAA
GAATTTAATC AGCTATTAAG CGCCGAGTTA CGCTTAGCCA GTTTATCGCG CGGTTATCGC
GCTGACGAAA CCTTAGAAGC TGAGCGCCAA GATCGTAACC AAACTCATGG TAAAGAACTA
AACCTCAAGT TGCGCTTATT AGATGATGAG TGGAAAGATG TTCGTGATGA GTTAAACCAG
GAATTATCTG CCGCTAAAGG TGACGCTGGC AAGTTTGAAG ATGAACTCAA TGCCATTGAA
GACCAGCATG CTGCCTTTTT AGATGCCGAC ATTGAACAAG CCAAAGCTGA TTTAGATAAT
TTGCCTAATT GGCGCAGTGA TGTTGAGAAC CTTAACGAGC GTCATAAATT ACAAACCGAA
AAACACCAAG ATATTGAAGC CGCCTTTAAT GCCCGCCGTA GTAAAATTGC TGAGCAATTA
CATCGCGAAC TTGAAACGCT ACATCTTGAG CAAGACACCC AACGTGAAGC GCGTGATAAG
CAACGTGAGC TTGCCAATGA CGATATCGCT AAACTAGAGC TGCAATGGCG TGAACAAACT
GATGCTGGTA AAGCTAAATT TAGCGAACAA GAATATCAAC TTAAATTAAC CGCTGCCGAG
CTTAAGCATC AAGTTGATGG TGTGACTTAC ACCGAAGATG AAAAAATGCG CTTAGCGATT
TTCGATGAGC GTATAAGTCT AGCTGATGAA GAGCAAGAAA CCTGTAATCA AAAGGTCGAT
CGTTTAACCA CAGAAGAGCG TAAACAACGG GCCAAGCGCG ACCAAGCTAA CGAAGCGCTG
CGTATATCCA GCATTCGCGT TAGTGACCGA GAAAATGCCA AAGAAGAACT GCACCATATG
TTGTTCCCAC AGTCGCATAC CTTATTGGAG TTTTTGCGTA AAGAAGCCCA CGGTTGGGAG
CACACCTTTG GTAAAGTTAT CGCGCCAGAG TTGTTGCATC GCAGCGATCT ACACCCAAGC
CTAACCAAAG ACAGCAGTGA AGCATTATTT GGGGTTAACC TCGATCTTAA AGCCATTGAT
GTACCTGAGT ATGCCGCTAC AGAGCAAGAT TTACGTATTC GTTTAGCCAA AGCAGAAGAA
GCACTAAAAA GTGCGCAAGA AATGCATGCC GAAGCGGAAG ATCAACTGGT TGCTATGAAT
ACGGCGCTCG ATAACATCAC CCGCGAACTG ACCTTTGCCC GTACAGCGTA CAAGAATAGC
CGTGAAGATT TACGCCGTGT GTTTGACGAG AAGCGTAACG AACAACAAAA AATCAATCAA
GCTGTGGCAG ATCGTAAAGT CGATTCGAGC AAGCGATTAG TACAACTTGA TAATGAACTT
AAGCTGCTTA GCAATCAGCA CCTTGGTTGG TTAAGCGAGC AAAAAGAGCA GGCGCTTGAA
GCGCGCATGG AAAAAAATGC CTATTGGCAA GAAGTGGTCG GCGCCATTGA TAATCAATTA
GGCCAGATTA AAGCCAATAT TGAACAACGC CGTGCAAATG CAAAAACCGA GCAAAAAGCA
GGTGAAACTT GGTACAAAAA TGAGCTTAAA TCACGTGGTG TTGATGAAGG CACCATTTTG
GCGCTTAAAA AACAGATCCG CGATCTTGAA GCCTGCATCA GTAATGCAGA ACAACGCCGC
AGTGAAGTGC TGCGTTTTGA TGATTGGTAT CAACATACCT GGCTTGTTCG AAAGCCTAAA
GTGCAAACTC AATTAACTGA TGTTAAGCGC GCTACGCTGG AATTGGAGCA ACTGCTAAAA
GCGAAAACGG CAGAAATAAA ACACCGAAGA GACAGTTTAG AAACCGAACG TAAAGCCTGT
GATGCCGCCC AAGTAGAGGC GTCTGAAAAC CTCACTAAGC TGCGTGCAGT GATGCGCAAG
TTAGCTGAGC TCAAATTGCC AGCTAATAAC GATGAAGCGA TGGGCAGCAT TGGCGAGCGT
TTGCGCCAAG GCGAAGATTT ATTGCTAAAG CGTGACTACT TAATGGGTTC TGTTAAACAA
TATGTTGAAC ACTTTGACTC GGTCATTGCC AGTAAATCAG GTTCAAGTTT GGCCGAATTT
TGGGAGCGGG CCCGTGATGA GTCTAGCTTT GTTAACGACA AAGGTATTCG TCTACTCGAC
TATCGCAAGT TAGTGCCACA GCTTGAGCAG TTATTGAATG TGATGGTGCC GCAATCGTTA
ATGGCAATTC GCGAACAAGG GCGTATTTTT GGTATTGATT TAACGGCGTT CTATGACGTG
TTAACCGATA TTGACCGCCG TATTGCCAGC CAAAGCGCGC GTATTACCCG TGAAGTGGGT
GAAGAATTAT TCCTCGAAGG AGTATCAGAG TCGGCTGTGC GAATTCGCTC TCGCATCAGC
GAACTGGAAT TTTGGCCTGA ACTTGAAGTG TTTGTTAAAG CCTTTAAAGC GTGGAAAGCA
GATGGTTTCA GCCTACTACC GGACGAGCAT TACACTAACT CAATGCGCCG TGCATTAGAC
ATTATTGGCC GTGCGGCATT AACCGGCGGT ATTGCGAAAC TGTTAGAAAT CGAACTGCGT
TTAAAAGAAG GTAACAGCGA CTTAATTATT CGTACCGACC GTCAGTTAAA CGAGTCTTCA
AGTCATGGTA TGGCTTACCT TATTTTATGT AAGTTTTTAT TGGCCTTCAC CCGTTTATTG
CGCGGCAAAG CCAATGTCAC TATCCATTGG CCAATTGATG AGTTAGGTAC GCTGCATCAC
ACTAACGTGA AGAAAATCTT CGATGCCTGT GAGAACAACA ATATCAGTGT ATTAGGGGCT
TTCCCAAATC CTGAATCTGA AGTGCTAAGT CTATTTGCTA ACCGTTACAT TATTAATAAG
CAAACTAAAA AGCTGCAGGT CGTTAAACCT AAAGCCAACC CGTTAGCGGC CCGTTTATCG
CAACGTAACA CTAAAACCGA AATGCCTACG GCGGAAATGA CTCGCGCTGA AACTGCTAAG
GAGCACATCT AA
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| Protein sequence | MVELLLNGHT NICGTNASGK TTLQRLVPVF YGEYPSRVVP STRDSFERWY LPHDSSYIIY
EYQKDDGLLY QAVLASAGDG KGVNYRFIGR AFELEHYIKS RNGDTIICHS MAGLGREVKR
DGVAHTNLLN TREFRAIIQN DRSLLNTGSN RNELRTYARQ FSLCDGEHSL RHIEKLAKAV
HSKEGKMETV KSMIAAILEE DGVNPPTSRL NPQRVETWIR ESQLVQGFEQ IRPEYEKLEQ
EFNQLLSAEL RLASLSRGYR ADETLEAERQ DRNQTHGKEL NLKLRLLDDE WKDVRDELNQ
ELSAAKGDAG KFEDELNAIE DQHAAFLDAD IEQAKADLDN LPNWRSDVEN LNERHKLQTE
KHQDIEAAFN ARRSKIAEQL HRELETLHLE QDTQREARDK QRELANDDIA KLELQWREQT
DAGKAKFSEQ EYQLKLTAAE LKHQVDGVTY TEDEKMRLAI FDERISLADE EQETCNQKVD
RLTTEERKQR AKRDQANEAL RISSIRVSDR ENAKEELHHM LFPQSHTLLE FLRKEAHGWE
HTFGKVIAPE LLHRSDLHPS LTKDSSEALF GVNLDLKAID VPEYAATEQD LRIRLAKAEE
ALKSAQEMHA EAEDQLVAMN TALDNITREL TFARTAYKNS REDLRRVFDE KRNEQQKINQ
AVADRKVDSS KRLVQLDNEL KLLSNQHLGW LSEQKEQALE ARMEKNAYWQ EVVGAIDNQL
GQIKANIEQR RANAKTEQKA GETWYKNELK SRGVDEGTIL ALKKQIRDLE ACISNAEQRR
SEVLRFDDWY QHTWLVRKPK VQTQLTDVKR ATLELEQLLK AKTAEIKHRR DSLETERKAC
DAAQVEASEN LTKLRAVMRK LAELKLPANN DEAMGSIGER LRQGEDLLLK RDYLMGSVKQ
YVEHFDSVIA SKSGSSLAEF WERARDESSF VNDKGIRLLD YRKLVPQLEQ LLNVMVPQSL
MAIREQGRIF GIDLTAFYDV LTDIDRRIAS QSARITREVG EELFLEGVSE SAVRIRSRIS
ELEFWPELEV FVKAFKAWKA DGFSLLPDEH YTNSMRRALD IIGRAALTGG IAKLLEIELR
LKEGNSDLII RTDRQLNESS SHGMAYLILC KFLLAFTRLL RGKANVTIHW PIDELGTLHH
TNVKKIFDAC ENNNISVLGA FPNPESEVLS LFANRYIINK QTKKLQVVKP KANPLAARLS
QRNTKTEMPT AEMTRAETAK EHI
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