| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0522 |
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| Symbol | |
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| ID | 4278655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 592539 |
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| End bp | 593108 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133280 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_749221 |
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| Protein GI | 114561708 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACAAT CTATCATCAA CAGCACTATC AAACCTTTCA AAGCAACAGC ATTCCACAAT
GGTGCTTTCG TTGAAGTTAC AGAGCAAGAT TTATTAGGCA AGTGGGCAGT AGTATTTTTC
TACCCAGCTG ACTTCACTTT CGTATGTCCA ACTGAATTAG GCGACATGGC TGATCATTAT
GAGAAGCTAC AGGCAATGGG CGTTGAAGTT TACTCAGTAT CAACTGACAC TCACTTTACT
CATAAAGCTT GGCATTCAAG TTCAGACACA ATCGGTAAAA TTACTTACCC AATGATAGGT
GACCCAACTG GCGCAATCAC TCGCAACTTT GGTGTGATGA TTGAAGAAGA CGGTTTAGCC
CTACGTGGTA CTTTCGTTAT CAACCCTGAA GGCCAAGTTA AAGTAGCTGA AATTCATGAC
CTAGGTATTG GCCGCAGCGC TTCTGAACTA GTTCGTAAGA TTCAAGCTGC ACAATATGTT
GCAACTCACG ATGGCGAAGT ATGTCCAGCT AAATGGCAGC CTGGTGAAGA AACATTAGCT
CCTTCAATTG ACCTAGTCGG TAAAATCTAA
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| Protein sequence | MTQSIINSTI KPFKATAFHN GAFVEVTEQD LLGKWAVVFF YPADFTFVCP TELGDMADHY
EKLQAMGVEV YSVSTDTHFT HKAWHSSSDT IGKITYPMIG DPTGAITRNF GVMIEEDGLA
LRGTFVINPE GQVKVAEIHD LGIGRSASEL VRKIQAAQYV ATHDGEVCPA KWQPGEETLA
PSIDLVGKI
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