Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0513 |
Symbol | |
ID | 4278646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 582403 |
End bp | 586041 |
Gene Length | 3639 bp |
Protein Length | 1212 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638133271 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_749212 |
Protein GI | 114561699 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGACAA AATTAGCCCT AGCCATTTCA GCAGCACTAA TATCAGGAAC TTGCTTTGCA GAGCCTGCAA ATAAATACAA CACTACCGAC CGTGTCAACA GCGAGTATGC TGGCATAAAA GCAACCAAAA CAGAAAAACA GTCAACAGTT TCAGCTTGGA TGATCAAGCT AAATACTCCC TCAGTATCAC AACAATCACG TTTATCTAAA GTATCGTCAG TTCAAGCAAC TGTATCAGTT AAAGAGTCTC AATCACGCGT TTTAAGCGCA ATTGACGGCT TGGATGCTGA TATACAAGTA GTTGGTCAAA CGTCAAAATT AGTTAACGCT ATTTTAGTAA AAGCAGATAA AAAACAATTA ATATCTTTAC TAAAGAATTC AGACGTTGCA GATATTTTAC CTATTTACGA TTACGAGCTA GATGTTGCTG ATAGCGCTGA TTACATTGGT GCTACCGCAG TTATTGAAGC TGGAATTGCT TCAGGTAAAG GACAAAAAGT AGCGGTATTA GACACAGGCG TTGATTACAC CCATAAATCA TTAGGCGGTT CAGGTCTTGT TGCTGACTAT GAAGCAGCAG TTGCTGCTCA AGCTGACATG CCAAACTGGC CACAAGGCAA AATTGTCGGT GGTTACGATT TCATCAATAA CGATCCAAAT CCAATTGATG TTGATACAAA CCACGGTACT CATGTTAGCC ATTCAGTTGT TGGTATAGCG CCAGATGTCG AATTGTATGT TTACTCTGTA TGTAATTCTG GTTGTCCAGG TCTTGCTCAG CTTTATGCGT TAGAAGCAGC AATGGATCCA AACAATGATG GCGATATTTC TGACCGTGTT AACACGGTTA ACATGTCATT AGGTGGTGAC TTTGGTGATA CTAAAGGCGG TGCAGTACAA GAGCTAATTG ATGAAATGGT TGAACTAGGC GTAAACCTAG TTATTTCTGC TGGTAACGAT GGCGCGACAC CATTTGTTGT TGGTGGTCCA AGTACATCAG TTAATGCATT ATCTGTTGGC GCAATGACTC ATCCGGCCAC CCCCGTTGGT AAAGTTGACG CGACGGCCGC AGGTGTTGAG TTAACAGCGG TTGCCGCGGG TTTCAATACT ACAAATACTT ACTCTTTCGA TAGCACTACA GCAAAATTAG TCGTGCCTAC ATCCAATTTG AACGGCTGTA CTGCATTTGC TAGTGACGTA GATTTTAGCG GTCAAATTCC TATTATTGAT CGCGGCGCTT GTAACTTTAC GAGCAAAGTA CTTAATGCCC AAGCCAAAGG CGCACCTTTT GTTATTGTTG CAAATAATGC TGCTGGTGCT GGTGCATCCA CAATGGGCGG TTCAGATCCT CTAGTTACAA TTCCATCTGT AATGATTTCT AAAGAAGAAG GTGATGCTCT AAAAGCGGAA ATAGCAAAAG GTGATGTAGC CTTCTCTATT ACATCTGTAG AAGTCACTAC TGCTGGTGCC ATTGCTACGT TTACATCACG CGGCCCTTCT ATTGCTGGTA CATTAAAGCC TGAAATTACA GCTCCTGGTA CGTCAATTAT GACTGCACAC CCAGGTCTTG GCGACGGTTT GTCTCCTATC AGCGGCACTT CATTCTCTAG CCCAATTACG GCTGGTGCAA TGAGTATAGT AAAAGAAGCT TTGCCAAATC GTAGCGCGCT AGAAATTAAA GCGACAATGA TGAACGCAGC TAACTTAAAT GTCACGGTTG AGCCTATTGA ATTAAATGCA GACGCTGAAT TAGCGCCAAT CAGCTATATC GGTGCTGGTC TTGTTGATAT TGAGAAATCA ATCAATCTAC CAGTTATTGC TTATGACAAA GCGACTATGC AAGCAGCTTT AGCATTTGGT CTTGTTTCAC TAAGTGAAAC ATCATCTATG ACTAAAACTA TTTCGGTGAA AAACTTCTCT GCAGAAGCGA AAACTTACAC ATTAATGGCA GAACAACGCT TCCAGAATGA TATCGATTCA GCGGCTGTCA CATTTGATAT GCCAGCAAGT ATCAAAATTC CTGCAGGGCA AACTAAAACG TTTGACGTGA CTGTCACAAT TGATCCAACA AAACTACCTG AATGGACATT AGACTCATCA TATGAACTGA GTGGTACCGC ACTTGAAGCT TCAGATGCGC TAACCTTATC TGAATATGAC GGTGCGATTA AGTTTATGGA TGGTGAAGAA CAAGCTTTAA ATGTTGTTTA TCATATTCTA CCAAAAGCCG CTGCAGCTGC ATCAGTATCA ACAGAAGTAA CCGCTGACGG TATTGTAAGA ACGTTGACTA ACGTAGGTGC AACTTCAATC ACTGACCCAT TTAGTGCACC ATTGACTGCG ACTAGCCCGA AAGACATGAC TAAACGCCAT GACTTACTCA ATGCATCGAG TGAATTAACA GGTAGTGCGA CATGTGATGA AGGAATTGCA ATTTGGAACA CCTTCCAAAT GCGCGATCCA ATTGTACATG GTTTAGTTGC TAGCTATAAC GTTGATTATG ATCTAGATAA TGATGGTGTT TATGATTACA CGGCTACAAC AATCAACCTA GACTGGTTCA GCAATGATGC AGTTACATAT CCTCGAGCTC TTTATGGTTT TGTTATGGCT TATGGAACAG GTAATGGAGC TTTCTCACCT GCTTACCATG TAACTGGTAA TGACTTCTTA ACAACCAAAG CTTGTTTCGA AGATATCGGC CTAACAGCTG CGGATCTTGG TACAACTATT GGTGTACGCT TCCGTGTCGA AGAATCTGAC TGGGAACCAA CATCTACAGG TACTGGCGAC GAAATTGAAG CAACTTTAGC ATTAGTAGGT TCAGATGCAA CTGCTGGATT AGTTGATGCT GAAGGTGAGC CAGTAACTGA ACTTAAGCCT GGCGAAAGCG CTATACTTAT AAATGAAGTT GGCAATAACT CTTTAGGTTA CATGCTACTG TCTGATAGCG GCTCAATGTC AGTCGTTGCC AACACTACTG ATGAAGGCAA CGTAGCACCT ACGGTTGAAG ACTTAGTCGT TTATGTAGAC AAAGGTGCAG CTGCAGGTAC TGAACTTGGT CAAGTAATTG CTACTGACCC TGATATGCTA ACCAGCCCAG TGTCTGAATT TATTGTTATG AGCTCAAACT CAAGCATGTT CATGATCGAC AGCAAAGGTA AAGTCAGCCT AAGTGCTACA GCTGTTATCG ACCAAATGAG CGAAACAATG GAAGCACAAG TTATTGCTAT TGATACCATG GGTAATCGCT CAGAGCCTGC TACGGTTTCT GTAATGATTA ACAACACTCA ACCAACTGTT GCGCCTACAG GCATGACTAG TACTGAAGGT TTTGTTGTTA CAGCTAAAGC CAATGGTAAA GATGCTGACG GTGATACCCT AACGTATAAC TGGGTTCAAA CAAGTGGTCC TACTGTTGCG TTTGGTAATG GCGGTCCAGC TATTAGCTTT ACTGCACCAT CAGGTAATAA TACCATTAAG TTCTCAGTAA CGGCTTCAGA TACTCGTTTA GAGAGTGCTG CTGGTACAGC AACTATTACA GTCACCAAGA AAGAAGAGAA ATCTTCTGGT GGTTCTATGG GTTGGTTAAC TGCACTATTA GTTCCATTAG CTGCATTACG TCGTCGTAAG CACTCATAA
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Protein sequence | MKTKLALAIS AALISGTCFA EPANKYNTTD RVNSEYAGIK ATKTEKQSTV SAWMIKLNTP SVSQQSRLSK VSSVQATVSV KESQSRVLSA IDGLDADIQV VGQTSKLVNA ILVKADKKQL ISLLKNSDVA DILPIYDYEL DVADSADYIG ATAVIEAGIA SGKGQKVAVL DTGVDYTHKS LGGSGLVADY EAAVAAQADM PNWPQGKIVG GYDFINNDPN PIDVDTNHGT HVSHSVVGIA PDVELYVYSV CNSGCPGLAQ LYALEAAMDP NNDGDISDRV NTVNMSLGGD FGDTKGGAVQ ELIDEMVELG VNLVISAGND GATPFVVGGP STSVNALSVG AMTHPATPVG KVDATAAGVE LTAVAAGFNT TNTYSFDSTT AKLVVPTSNL NGCTAFASDV DFSGQIPIID RGACNFTSKV LNAQAKGAPF VIVANNAAGA GASTMGGSDP LVTIPSVMIS KEEGDALKAE IAKGDVAFSI TSVEVTTAGA IATFTSRGPS IAGTLKPEIT APGTSIMTAH PGLGDGLSPI SGTSFSSPIT AGAMSIVKEA LPNRSALEIK ATMMNAANLN VTVEPIELNA DAELAPISYI GAGLVDIEKS INLPVIAYDK ATMQAALAFG LVSLSETSSM TKTISVKNFS AEAKTYTLMA EQRFQNDIDS AAVTFDMPAS IKIPAGQTKT FDVTVTIDPT KLPEWTLDSS YELSGTALEA SDALTLSEYD GAIKFMDGEE QALNVVYHIL PKAAAAASVS TEVTADGIVR TLTNVGATSI TDPFSAPLTA TSPKDMTKRH DLLNASSELT GSATCDEGIA IWNTFQMRDP IVHGLVASYN VDYDLDNDGV YDYTATTINL DWFSNDAVTY PRALYGFVMA YGTGNGAFSP AYHVTGNDFL TTKACFEDIG LTAADLGTTI GVRFRVEESD WEPTSTGTGD EIEATLALVG SDATAGLVDA EGEPVTELKP GESAILINEV GNNSLGYMLL SDSGSMSVVA NTTDEGNVAP TVEDLVVYVD KGAAAGTELG QVIATDPDML TSPVSEFIVM SSNSSMFMID SKGKVSLSAT AVIDQMSETM EAQVIAIDTM GNRSEPATVS VMINNTQPTV APTGMTSTEG FVVTAKANGK DADGDTLTYN WVQTSGPTVA FGNGGPAISF TAPSGNNTIK FSVTASDTRL ESAAGTATIT VTKKEEKSSG GSMGWLTALL VPLAALRRRK HS
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