| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0513 |
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| Symbol | |
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| ID | 4278646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 582403 |
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| End bp | 586041 |
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| Gene Length | 3639 bp |
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| Protein Length | 1212 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133271 |
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| Product | peptidase S8/S53 subtilisin kexin sedolisin |
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| Protein accession | YP_749212 |
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| Protein GI | 114561699 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGACAA AATTAGCCCT AGCCATTTCA GCAGCACTAA TATCAGGAAC TTGCTTTGCA
GAGCCTGCAA ATAAATACAA CACTACCGAC CGTGTCAACA GCGAGTATGC TGGCATAAAA
GCAACCAAAA CAGAAAAACA GTCAACAGTT TCAGCTTGGA TGATCAAGCT AAATACTCCC
TCAGTATCAC AACAATCACG TTTATCTAAA GTATCGTCAG TTCAAGCAAC TGTATCAGTT
AAAGAGTCTC AATCACGCGT TTTAAGCGCA ATTGACGGCT TGGATGCTGA TATACAAGTA
GTTGGTCAAA CGTCAAAATT AGTTAACGCT ATTTTAGTAA AAGCAGATAA AAAACAATTA
ATATCTTTAC TAAAGAATTC AGACGTTGCA GATATTTTAC CTATTTACGA TTACGAGCTA
GATGTTGCTG ATAGCGCTGA TTACATTGGT GCTACCGCAG TTATTGAAGC TGGAATTGCT
TCAGGTAAAG GACAAAAAGT AGCGGTATTA GACACAGGCG TTGATTACAC CCATAAATCA
TTAGGCGGTT CAGGTCTTGT TGCTGACTAT GAAGCAGCAG TTGCTGCTCA AGCTGACATG
CCAAACTGGC CACAAGGCAA AATTGTCGGT GGTTACGATT TCATCAATAA CGATCCAAAT
CCAATTGATG TTGATACAAA CCACGGTACT CATGTTAGCC ATTCAGTTGT TGGTATAGCG
CCAGATGTCG AATTGTATGT TTACTCTGTA TGTAATTCTG GTTGTCCAGG TCTTGCTCAG
CTTTATGCGT TAGAAGCAGC AATGGATCCA AACAATGATG GCGATATTTC TGACCGTGTT
AACACGGTTA ACATGTCATT AGGTGGTGAC TTTGGTGATA CTAAAGGCGG TGCAGTACAA
GAGCTAATTG ATGAAATGGT TGAACTAGGC GTAAACCTAG TTATTTCTGC TGGTAACGAT
GGCGCGACAC CATTTGTTGT TGGTGGTCCA AGTACATCAG TTAATGCATT ATCTGTTGGC
GCAATGACTC ATCCGGCCAC CCCCGTTGGT AAAGTTGACG CGACGGCCGC AGGTGTTGAG
TTAACAGCGG TTGCCGCGGG TTTCAATACT ACAAATACTT ACTCTTTCGA TAGCACTACA
GCAAAATTAG TCGTGCCTAC ATCCAATTTG AACGGCTGTA CTGCATTTGC TAGTGACGTA
GATTTTAGCG GTCAAATTCC TATTATTGAT CGCGGCGCTT GTAACTTTAC GAGCAAAGTA
CTTAATGCCC AAGCCAAAGG CGCACCTTTT GTTATTGTTG CAAATAATGC TGCTGGTGCT
GGTGCATCCA CAATGGGCGG TTCAGATCCT CTAGTTACAA TTCCATCTGT AATGATTTCT
AAAGAAGAAG GTGATGCTCT AAAAGCGGAA ATAGCAAAAG GTGATGTAGC CTTCTCTATT
ACATCTGTAG AAGTCACTAC TGCTGGTGCC ATTGCTACGT TTACATCACG CGGCCCTTCT
ATTGCTGGTA CATTAAAGCC TGAAATTACA GCTCCTGGTA CGTCAATTAT GACTGCACAC
CCAGGTCTTG GCGACGGTTT GTCTCCTATC AGCGGCACTT CATTCTCTAG CCCAATTACG
GCTGGTGCAA TGAGTATAGT AAAAGAAGCT TTGCCAAATC GTAGCGCGCT AGAAATTAAA
GCGACAATGA TGAACGCAGC TAACTTAAAT GTCACGGTTG AGCCTATTGA ATTAAATGCA
GACGCTGAAT TAGCGCCAAT CAGCTATATC GGTGCTGGTC TTGTTGATAT TGAGAAATCA
ATCAATCTAC CAGTTATTGC TTATGACAAA GCGACTATGC AAGCAGCTTT AGCATTTGGT
CTTGTTTCAC TAAGTGAAAC ATCATCTATG ACTAAAACTA TTTCGGTGAA AAACTTCTCT
GCAGAAGCGA AAACTTACAC ATTAATGGCA GAACAACGCT TCCAGAATGA TATCGATTCA
GCGGCTGTCA CATTTGATAT GCCAGCAAGT ATCAAAATTC CTGCAGGGCA AACTAAAACG
TTTGACGTGA CTGTCACAAT TGATCCAACA AAACTACCTG AATGGACATT AGACTCATCA
TATGAACTGA GTGGTACCGC ACTTGAAGCT TCAGATGCGC TAACCTTATC TGAATATGAC
GGTGCGATTA AGTTTATGGA TGGTGAAGAA CAAGCTTTAA ATGTTGTTTA TCATATTCTA
CCAAAAGCCG CTGCAGCTGC ATCAGTATCA ACAGAAGTAA CCGCTGACGG TATTGTAAGA
ACGTTGACTA ACGTAGGTGC AACTTCAATC ACTGACCCAT TTAGTGCACC ATTGACTGCG
ACTAGCCCGA AAGACATGAC TAAACGCCAT GACTTACTCA ATGCATCGAG TGAATTAACA
GGTAGTGCGA CATGTGATGA AGGAATTGCA ATTTGGAACA CCTTCCAAAT GCGCGATCCA
ATTGTACATG GTTTAGTTGC TAGCTATAAC GTTGATTATG ATCTAGATAA TGATGGTGTT
TATGATTACA CGGCTACAAC AATCAACCTA GACTGGTTCA GCAATGATGC AGTTACATAT
CCTCGAGCTC TTTATGGTTT TGTTATGGCT TATGGAACAG GTAATGGAGC TTTCTCACCT
GCTTACCATG TAACTGGTAA TGACTTCTTA ACAACCAAAG CTTGTTTCGA AGATATCGGC
CTAACAGCTG CGGATCTTGG TACAACTATT GGTGTACGCT TCCGTGTCGA AGAATCTGAC
TGGGAACCAA CATCTACAGG TACTGGCGAC GAAATTGAAG CAACTTTAGC ATTAGTAGGT
TCAGATGCAA CTGCTGGATT AGTTGATGCT GAAGGTGAGC CAGTAACTGA ACTTAAGCCT
GGCGAAAGCG CTATACTTAT AAATGAAGTT GGCAATAACT CTTTAGGTTA CATGCTACTG
TCTGATAGCG GCTCAATGTC AGTCGTTGCC AACACTACTG ATGAAGGCAA CGTAGCACCT
ACGGTTGAAG ACTTAGTCGT TTATGTAGAC AAAGGTGCAG CTGCAGGTAC TGAACTTGGT
CAAGTAATTG CTACTGACCC TGATATGCTA ACCAGCCCAG TGTCTGAATT TATTGTTATG
AGCTCAAACT CAAGCATGTT CATGATCGAC AGCAAAGGTA AAGTCAGCCT AAGTGCTACA
GCTGTTATCG ACCAAATGAG CGAAACAATG GAAGCACAAG TTATTGCTAT TGATACCATG
GGTAATCGCT CAGAGCCTGC TACGGTTTCT GTAATGATTA ACAACACTCA ACCAACTGTT
GCGCCTACAG GCATGACTAG TACTGAAGGT TTTGTTGTTA CAGCTAAAGC CAATGGTAAA
GATGCTGACG GTGATACCCT AACGTATAAC TGGGTTCAAA CAAGTGGTCC TACTGTTGCG
TTTGGTAATG GCGGTCCAGC TATTAGCTTT ACTGCACCAT CAGGTAATAA TACCATTAAG
TTCTCAGTAA CGGCTTCAGA TACTCGTTTA GAGAGTGCTG CTGGTACAGC AACTATTACA
GTCACCAAGA AAGAAGAGAA ATCTTCTGGT GGTTCTATGG GTTGGTTAAC TGCACTATTA
GTTCCATTAG CTGCATTACG TCGTCGTAAG CACTCATAA
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| Protein sequence | MKTKLALAIS AALISGTCFA EPANKYNTTD RVNSEYAGIK ATKTEKQSTV SAWMIKLNTP
SVSQQSRLSK VSSVQATVSV KESQSRVLSA IDGLDADIQV VGQTSKLVNA ILVKADKKQL
ISLLKNSDVA DILPIYDYEL DVADSADYIG ATAVIEAGIA SGKGQKVAVL DTGVDYTHKS
LGGSGLVADY EAAVAAQADM PNWPQGKIVG GYDFINNDPN PIDVDTNHGT HVSHSVVGIA
PDVELYVYSV CNSGCPGLAQ LYALEAAMDP NNDGDISDRV NTVNMSLGGD FGDTKGGAVQ
ELIDEMVELG VNLVISAGND GATPFVVGGP STSVNALSVG AMTHPATPVG KVDATAAGVE
LTAVAAGFNT TNTYSFDSTT AKLVVPTSNL NGCTAFASDV DFSGQIPIID RGACNFTSKV
LNAQAKGAPF VIVANNAAGA GASTMGGSDP LVTIPSVMIS KEEGDALKAE IAKGDVAFSI
TSVEVTTAGA IATFTSRGPS IAGTLKPEIT APGTSIMTAH PGLGDGLSPI SGTSFSSPIT
AGAMSIVKEA LPNRSALEIK ATMMNAANLN VTVEPIELNA DAELAPISYI GAGLVDIEKS
INLPVIAYDK ATMQAALAFG LVSLSETSSM TKTISVKNFS AEAKTYTLMA EQRFQNDIDS
AAVTFDMPAS IKIPAGQTKT FDVTVTIDPT KLPEWTLDSS YELSGTALEA SDALTLSEYD
GAIKFMDGEE QALNVVYHIL PKAAAAASVS TEVTADGIVR TLTNVGATSI TDPFSAPLTA
TSPKDMTKRH DLLNASSELT GSATCDEGIA IWNTFQMRDP IVHGLVASYN VDYDLDNDGV
YDYTATTINL DWFSNDAVTY PRALYGFVMA YGTGNGAFSP AYHVTGNDFL TTKACFEDIG
LTAADLGTTI GVRFRVEESD WEPTSTGTGD EIEATLALVG SDATAGLVDA EGEPVTELKP
GESAILINEV GNNSLGYMLL SDSGSMSVVA NTTDEGNVAP TVEDLVVYVD KGAAAGTELG
QVIATDPDML TSPVSEFIVM SSNSSMFMID SKGKVSLSAT AVIDQMSETM EAQVIAIDTM
GNRSEPATVS VMINNTQPTV APTGMTSTEG FVVTAKANGK DADGDTLTYN WVQTSGPTVA
FGNGGPAISF TAPSGNNTIK FSVTASDTRL ESAAGTATIT VTKKEEKSSG GSMGWLTALL
VPLAALRRRK HS
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