| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0505 |
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| Symbol | |
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| ID | 4278585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 572026 |
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| End bp | 573618 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638133262 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_749204 |
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| Protein GI | 114561691 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.903517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGATAT CCATAAGACA GTTATTACAA AGTCCTATAG CTCGAAAATT AACGCTTTCG
ATCGTGATCT TTAGCTCTTT AATTACGCTA GTGACGACGG CTTATCAGCT AGTAAGTGAT
TATCAAAATG ATGTAAGTAG AATTGATCGC GTTTTTTCGA ATATAGAAGC GGTAAATTTA
GAAGTGCTGG CAGCCAGCTT ATGGGTAATA GATGAACACT TGATCGACAC GCAACTCCGT
GGTTTGAGTC AATTACCTGA TATAAACTAT ATTTCTATCC GTGATGACAG TAATCAAGAA
TGGCATTTTG GTGAATATAA GAACACGGCT GTTATTGAGA AAAAATACCC ATTAATTTAT
ACCAATAATG AAAACATTCC TGTTGGTACG CTCATCGTAC AAGCCGATCT AAATGTCATT
TATGATCGTT TGTATAATAA AACAATACTG ATTTTATTAT CCAACGCGAT TAAAACCTTC
TTGGTAGCAG GCTTTATCTT GTTTCTGGTG TGGTTCAATG TAACCAAGCA CCTTCGTCAT
TTAAGTAAAT ATTGTGATGA TATTAGCTTA GACCACAACT TTACTCCCTT GGATTTTAAT
CGAAAGCCGC AACATGATGA ATTCAGTTTA GTAGCAGATG CGGTTAATAC TATGCAACGG
CAAATCAGAG GCTCTTATCA AGCATTGCGC CAATCAAAAG TCGATCTCCA GCATGCTCTT
GAAGATCGCG ATCGTTTACT GTTGTTAGAA CGCAGCTATA AAGATGAGCT CACGCGCCAA
GTTAAAGAAC AGACCAAAGA ACTTGAACAA TCATTGCAGA TGTTGAAACG AACTCAACAA
GTGCTTATAG AAAAAGAAAA AATGGCTGCA TTAGGTGGCT TAGTTTCTGG CGTAGCTCAT
GAAATTAATA CCCCTATTGG TATTTGCTTA ACGGCTGCCA GCTCGCAATT GTCTCATATA
GAAGAGTTGA TCAAATTGAT CCATAGCGAT GATGCCACTT TAGAACAAAT AAATGAAATT
TTAGAGCAAT ATCAACAAAG CAGTCAGTTA ATCGTCAGTA ATATCACTCG TGCGAGTTAT
TTGATCCAAC AATTTAAGTC TATTGCCGCA GAACAAAGCC ATGAGCAAAA CACGACCTTT
AATTTGAGTC ATCAATTACG CGATATTACT GATTCAACAT TAATGATCTT TTCACCGCAA
GAAGTCGAAA TAACGATCAG TATTGATGAA CAGTTGCAAC TTAATAGTAA TGCCAGTTTA
TTAAGCCAAG CGATTACTAA TGTTGTATCA AATGCATTTT CACATGCATT TAAAGATGTT
ACTCAAGCAA AGATCCACAT TAATGTCGTT ACTGAGCCAG AGAGTATTCA TATAGAAATT
CAAAATAATG GCGCGGCTAT TCCTAATGAC ATCGTCGAAC ATATTTTCGA ACCCTTCTTC
ACTACAGCTC GTCATAAAGG AGGAGTAGGT TTAGGGCTCG CGGCAGCGTT TAACGCAGTG
GCTCAGCTTA AAGGCAATAT CAGTTATGTA CCTATTTCAC CACTTGGTGG GCCCATGTTC
GTGATTAGCG TACCGAGATT ACCAACAGCT TAG
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| Protein sequence | MLISIRQLLQ SPIARKLTLS IVIFSSLITL VTTAYQLVSD YQNDVSRIDR VFSNIEAVNL
EVLAASLWVI DEHLIDTQLR GLSQLPDINY ISIRDDSNQE WHFGEYKNTA VIEKKYPLIY
TNNENIPVGT LIVQADLNVI YDRLYNKTIL ILLSNAIKTF LVAGFILFLV WFNVTKHLRH
LSKYCDDISL DHNFTPLDFN RKPQHDEFSL VADAVNTMQR QIRGSYQALR QSKVDLQHAL
EDRDRLLLLE RSYKDELTRQ VKEQTKELEQ SLQMLKRTQQ VLIEKEKMAA LGGLVSGVAH
EINTPIGICL TAASSQLSHI EELIKLIHSD DATLEQINEI LEQYQQSSQL IVSNITRASY
LIQQFKSIAA EQSHEQNTTF NLSHQLRDIT DSTLMIFSPQ EVEITISIDE QLQLNSNASL
LSQAITNVVS NAFSHAFKDV TQAKIHINVV TEPESIHIEI QNNGAAIPND IVEHIFEPFF
TTARHKGGVG LGLAAAFNAV AQLKGNISYV PISPLGGPMF VISVPRLPTA
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