| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0494 |
|---|
| Symbol | zntR |
|---|
| ID | 4278575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 561573 |
|---|
| End bp | 562034 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638133252 |
|---|
| Product | zinc-responsive transcriptional regulator |
|---|
| Protein accession | YP_749194 |
|---|
| Protein GI | 114561681 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02043] Zn(II)-responsive transcriptional regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCGAA TAGGCAAACT TTCTGCTTTA TATGACATTA AAGCAGACAC ATTACGGTTT
TACGAAAAGC ATGGTTTGTT ATCACCTTCA AGTCGCTCTG ATTCTGGGTA TCGGTTATAC
AACCAAGCTG ACTCTGAACG GCTCAAGTTT ATATTACGCG CTAAAGCGGT TGGTTTCTCG
CTTAACGATA TTGCCGATTT ATTATCTATC GAAGTGGACA AGTCCAATCG TGCATGTGCA
GACGTTAAAG GTTTGGTTGA TACCAAGCTT GAGCAAGTGG AAGCCAAACT GGCCGAGTTA
CAACACTTTG CAACATCGCT AAAAAGTTTA TCGAATACCT GTTGTGGTGG CCCTGATAGC
GCCGAGCATT GCTCGATACT TGAAGCGTTA GAGTCGTCTG ACAAACACAT TATTGCTAAA
AAAGAACATC ATCATTTTGC TCATTCAGGT CATAAGGATT AA
|
|---|
| Protein sequence | MYRIGKLSAL YDIKADTLRF YEKHGLLSPS SRSDSGYRLY NQADSERLKF ILRAKAVGFS
LNDIADLLSI EVDKSNRACA DVKGLVDTKL EQVEAKLAEL QHFATSLKSL SNTCCGGPDS
AEHCSILEAL ESSDKHIIAK KEHHHFAHSG HKD
|
|---|
| |