| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0493 |
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| Symbol | purH |
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| ID | 4278574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 559676 |
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| End bp | 561265 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638133251 |
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| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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| Protein accession | YP_749193 |
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| Protein GI | 114561680 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
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| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATG TCAGACCAAT TCGTCGCGCG CTATTAAGCG TATCAGATAA AACTGGAATC
CTTGAGTTTG CACAAGCGCT GCATGCACAA GGTGTTGAAC TCTTATCAAC GGGCGGTACT
GCAAAGTTAC TTGCAGACAA TAATATCCCG GTAATGGAAG TGTCTGACTA CACGGGTCAC
CCAGAAATTA TGGATGGCCG TGTTAAAACC CTACACCCAA AAATTCACGG TGGCATTCTA
GCTCGCCGCG GTATTGACGA AATCGTCATG GAACAAAACG CCATTAAGCC TATCGACTTA
GTTACGGTTA ACTTATACCC ATTTGCTGAA ACCGTTGCAA AACCAGGTTG CACCTTAGCG
GACGCTGTTG AGAACATCGA CATTGGCGGC CCAACCATGG TGCGTTCTAC GGCTAAAAAC
CACAAAGACA CAACAATAGT CGTTAACGCT AAAGATTACG GCCGCGTGAT TGCAGAAATG
CAAGCCAACA ACGGCAGCAC TACTTTAGAG ACGCGTTTTG ACTTAGCCAT TGCCGCCTTT
GAACATACCG CAGCGTATGA CGGCATGATT GCTAACTACT TTGGTACTAT GGTGCCAGCG
CACAGTAACG ACGAATGTCA TGACGATTCA ACGTTCCCAC GTACTTTCAA CAGTCAGTTT
GTCAAAAAAC AAGACTTACG TTACGGTGAA AACAGCCATC AAAAAGCGGC GTTTTATGTC
GACACGCAAA TTGATGAAGC TTCAGTTGCC AGCGCGATTC AGCTACAAGG TAAGGCTTTG
TCTTACAACA ATATCGCTGA TACCGATTCA GCTCTTGAAT GTGTAAAAGA ATTCGAAGGC
CCAGCCTGCG TTATCGTTAA GCACGCCAAC CCTTGTGGTG TGGCATTAGG CGCTAACTTA
TTAGAAGCTT ACGACCGCGC ATTTAAAACC GACCCAACAT CAGCCTTTGG TGGCATCATT
GCCTTTAACC AAGAGTTAGA TGCACAAACG GCGCAAGCCA TTGTTGACCG TCAGTTTGTT
GAAGTCATCA TTGCCCCTAA AGTGAGCCAA GCCGCACGCG ACATCATTGC TGCTAAAGCT
AACGTGCGTT TATTAGAATG TGGTGAGTGG AATACTAAAA CCACAACGCT TGATTACAAA
CGTGTTAATG GTGGCTTGTT AATACAAGAC CGCGATCAAG GCATGGTGAA CTTAGAAGAC
GTTAAAGTCG TGTCTAAGCG TCAACCAACT GCTGAACAGT TAAAAGACTT AATGTTCTGC
TGGAAAGTGG CTAAGTTTGT TAAATCTAAC GCCATTGTTT ACGCTAAAGA CGGCATGACT
ATCGGTGTCG GAGCAGGCCA AATGAGCCGC GTATATTCAG CTAAAATAGC GGGTATAAAA
GCTGCCGATG AAGGCCTAGT GGTTGAAAAT TCAGTAATGG CATCTGACGC TTTCTTCCCA
TTCCGTGATG GTATCGACGC AGCAGCAGCG GCAGGTATTA GCTGCATCAT TCAACCGGGC
GGTTCAATTC GCGATGAAGA AATCATCGCC GCAGCAGACG AGCACGGTAT GGCAATGGTG
TTTACTGGCA TGCGTCACTT CCGCCACTAA
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| Protein sequence | MNNVRPIRRA LLSVSDKTGI LEFAQALHAQ GVELLSTGGT AKLLADNNIP VMEVSDYTGH
PEIMDGRVKT LHPKIHGGIL ARRGIDEIVM EQNAIKPIDL VTVNLYPFAE TVAKPGCTLA
DAVENIDIGG PTMVRSTAKN HKDTTIVVNA KDYGRVIAEM QANNGSTTLE TRFDLAIAAF
EHTAAYDGMI ANYFGTMVPA HSNDECHDDS TFPRTFNSQF VKKQDLRYGE NSHQKAAFYV
DTQIDEASVA SAIQLQGKAL SYNNIADTDS ALECVKEFEG PACVIVKHAN PCGVALGANL
LEAYDRAFKT DPTSAFGGII AFNQELDAQT AQAIVDRQFV EVIIAPKVSQ AARDIIAAKA
NVRLLECGEW NTKTTTLDYK RVNGGLLIQD RDQGMVNLED VKVVSKRQPT AEQLKDLMFC
WKVAKFVKSN AIVYAKDGMT IGVGAGQMSR VYSAKIAGIK AADEGLVVEN SVMASDAFFP
FRDGIDAAAA AGISCIIQPG GSIRDEEIIA AADEHGMAMV FTGMRHFRH
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