| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0484 |
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| Symbol | |
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| ID | 4278548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 549967 |
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| End bp | 551424 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133242 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_749184 |
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| Protein GI | 114561671 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGCT TATTTAATCG GTTGTTTTTA GCATCCACAA TCATCGTGTT ATTACTGTTT
GTCGCGTTAT GGCAATGGCT ACAACTTAAC CATGAATTTA GCCGTAACCA AATTCAGCAA
TCACTGCACC TACAACTTGC CGAGCACATG GCGCACATCA ATCCTTTATT ATCGCAAGGG
ATCACGTCAG ACGCCGCACT TAAAGAAGCC TTTCACGACT TTATGTTGCT AGGCCCAAGT
TTTGAAATTT ACACCTTAGA CCCTGATGGC AACGTGATTG CTTATGACGC CAAAGAAGAA
AAAATTAAAA CTCACCGAGT CGATACGGCA ATCATTCAGC AGTTTTTAAA TGGCGTCAGC
CTACCTGTAC TTGGTACCGA TCCGCGTAGC GTAGATACCC ACAAGATTTT TTCCGCCAGT
AAACTTGTCA CCAAAGATGG GCTTCATAGC GGTTATTTGT ATGTCATCAT TGGCGGTGAA
GATTACGACA GCTGGCAGGC ACTGATTAAC GCCGAAAATC AACCTAAAAT CTGGGGCGCT
ACAATCGGAT TTTGGATCAT TTTTGCCTTA GTGCTATTCG TGATTTTATT GCGCTATTTT
ACCCGCCCAA TCCAAAAGCT CGCGCAAGAC TTAACCGAAC TTAAAAACAC CCCAATGTCA
GACAAACTGA TGTTACCCCA GCGTTATCGT GGCAGCTTAG AAATAAGCCA ACTGAGTCAT
CATATCAATC ATTTATTGCA AGAAATCCAA TTGCAGCAAC AACAAGTTAA ACGCCAACAA
CAAGCTAAGC ATGACTTTTT ACTGCATTTG TCTCATGACT TAAAAACCCC GCTTACTGCA
TTGTTAGGTT ATATCGATAC TTGGTTAATA TTACCCGAGC ACGAACGGGA CGAAGCGTTG
ATCCAATATG CAGCAAACTC AGGCCAAACC TTGCAACAAC TACTAGCACA GTTATTAGAA
TTGGCCGCCC TAGAAAATGG TCAAATCGAT GCACAACTTC AACAAGTCAA CCTAAGCGAA
CTGCTTAGCG ATATTGAACA AACCTTTACC CCACGAGCAA AAAAGCTCGG GGTTCAATTA
GATTTTGACA TCAACCATGC CAGCCAAATC TATACCGACC CCGCACTAAT GCGCCGCATA
CTCAATAACT TGGTCGATAA CGCCCTGCGC TACACCCCCG CTGGTGGCAA GATACAAATC
GTCAACGCAC AACACAACGG CCAACAATGG TTAACCGTGC GTGACACTGG CGCTGGCATG
CACAAGCATG AAGTTGACGC CCTGAAGCAA TTGTCGATGA CAAGGTTGTC GTTTGAAGCG
AATCAAAGCC TGCCACAACT CGGCGTCGGA CTCGCCATTG TCAGGCAATT ATTGGGCTTA
TTGAAATGCA GAATTGAAAT CGACAGCCAA CCCGGCGTTG GCAGCGAATT TAAGATAGAG
CTTGTAACGC AGGGTTAG
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| Protein sequence | MNRLFNRLFL ASTIIVLLLF VALWQWLQLN HEFSRNQIQQ SLHLQLAEHM AHINPLLSQG
ITSDAALKEA FHDFMLLGPS FEIYTLDPDG NVIAYDAKEE KIKTHRVDTA IIQQFLNGVS
LPVLGTDPRS VDTHKIFSAS KLVTKDGLHS GYLYVIIGGE DYDSWQALIN AENQPKIWGA
TIGFWIIFAL VLFVILLRYF TRPIQKLAQD LTELKNTPMS DKLMLPQRYR GSLEISQLSH
HINHLLQEIQ LQQQQVKRQQ QAKHDFLLHL SHDLKTPLTA LLGYIDTWLI LPEHERDEAL
IQYAANSGQT LQQLLAQLLE LAALENGQID AQLQQVNLSE LLSDIEQTFT PRAKKLGVQL
DFDINHASQI YTDPALMRRI LNNLVDNALR YTPAGGKIQI VNAQHNGQQW LTVRDTGAGM
HKHEVDALKQ LSMTRLSFEA NQSLPQLGVG LAIVRQLLGL LKCRIEIDSQ PGVGSEFKIE
LVTQG
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