Gene Sfri_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0474 
Symbol 
ID4278538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp540717 
End bp541337 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content40% 
IMG OID638133232 
Producthypothetical protein 
Protein accessionYP_749174 
Protein GI114561661 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCTA ATCACTTTGC TTTGTTAACT TGTGCAGCCA TTGAAACCGC TTTTAACCAA 
CTGCCAGCAC AGGCTAAAAG TGACTATGCT CGCCAAAAGT CATTGCACGG CAAAGTATTT 
TGTATTCAAT TGAGTCAGTT AAATTGGCCC ATTTATTTGG TGTTTGCCAA ACAAATTCAA 
GTGCTGAGCC ATTACGAAGC TGATGTTGCT GTAACCGTAC GAGCTGATGC ATCAACATTA 
TATCAGCTGA CTGAAGGCGC TAATTTAACG GAGCTTATCA AACAAGATAA ACTCAGTTTG 
GAAGGCGATA TTCAATTACT GCAATCGTTA AGCCATTATT TACAGAATAT TCACGTTGAT 
TTTGCTGAAC CATTATCACG TTATATTGGT GATGCTCCGA CGCATAAACT CGTTGCTACA 
GCAAAACAAT TTAACCATGA TATCAAACTG GTTTTACAAA AAACTCGCTC ACACATCAGC 
CAGTTAACCA CTGAAGAATA TCGCTTGGCA CCGCATAAAA TTGAATGGCT ACACTTTCGT 
GATAATCTGG ACGAACTAGT CAGTCAAACC GAACGTATCG AAGCCAAGAT AGCCCAATTA 
AGAGATCAAA TAACGCAATG A
 
Protein sequence
MTPNHFALLT CAAIETAFNQ LPAQAKSDYA RQKSLHGKVF CIQLSQLNWP IYLVFAKQIQ 
VLSHYEADVA VTVRADASTL YQLTEGANLT ELIKQDKLSL EGDIQLLQSL SHYLQNIHVD 
FAEPLSRYIG DAPTHKLVAT AKQFNHDIKL VLQKTRSHIS QLTTEEYRLA PHKIEWLHFR 
DNLDELVSQT ERIEAKIAQL RDQITQ