| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0471 |
|---|
| Symbol | |
|---|
| ID | 4277084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 538305 |
|---|
| End bp | 538709 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638133229 |
|---|
| Product | twin-arginine translocation protein, TatB subunit |
|---|
| Protein accession | YP_749171 |
|---|
| Protein GI | 114561658 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1826] Sec-independent protein secretion pathway components |
|---|
| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGACG GTATCGGCTT TATGGAGCTG CTGCTGATCG GTATTTTGGG GCTAGTAGTA
CTAGGCCCCG AAAGACTACC GGTTGCAGTA CGTTCGTTAA CAGGTTGGAT CCGCGCGCTT
AAGCGCATGG CTAACTCTGT CAAAGATGAA CTTGAGCAAG AGCTAAAAAT TGATCAGTTA
CATGCTGATT TAAAAAAAGC TGAAAGCAAA GGTTTAGCCA ATTTGTCGCC AGAGCTACAA
GAGTCGATTG ATCAGCTGAA AAAAGCCGCT GAGTCAGTGA ATCGCCCTTA TAAAGTTGAA
GACACATCAC CTGTAGCGCC AAAAGCATCA CCTGACGAGT CTCCTTCAGT CGTAGAAGCT
AAGTCATCTG AAGCGACTAG CGAAAACAGT TCAACCCCTA AATAA
|
|---|
| Protein sequence | MFDGIGFMEL LLIGILGLVV LGPERLPVAV RSLTGWIRAL KRMANSVKDE LEQELKIDQL
HADLKKAESK GLANLSPELQ ESIDQLKKAA ESVNRPYKVE DTSPVAPKAS PDESPSVVEA
KSSEATSENS STPK
|
|---|
| |