| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0470 |
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| Symbol | |
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| ID | 4277083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 537546 |
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| End bp | 538292 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133228 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_749170 |
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| Protein GI | 114561657 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGCAGC AGCAACCGCT TATTAGCCAT TTGCTTGAAT TACGTAACAA ATTGCTTAGA
GCCATTGGCA GCGTGTTATT GGTATTCATT ACTATTGTGT ATTGGGCTAA CGATATTTAT
CACTACATAG CTCTACCACT AATGCGTTCG CTTCCAGAAA CAGGCAGCAT GATTGCAACC
GACGTTGCCG CGCCTTTTTT TGCACCCTTT AAATTAACAC TCGTGCTAGC ATTCTTCATC
GCCATTCCCT ATGTACTCTA TCAAGTATGG TCTTTTGTCG CCCCTGGATT ATACAAACAT
GAAAAACGCT TAGTTGTTCC CTTGTTAGCC AGCAGCACCC TGTTGTTTTA TCTTGGAATA
GCCTTTGCCT ACTATATTGT TTTCCCCGTT GTATTTGGTT TTTTCACTAG TGTAGTTCCA
GATGGCGTGC AAGTTGCTAC TGATATCAGC AGCTATTTGA GTTTTATTTT AAAACTGTTT
TTTGCCTTTG GTTTAGCTTT TGAAATACCT GTAGCAGTGG TTTTGTTATG CTGGGCTGGT
GTTACCACAC CCGATGAGTT ACGCCAAAAA CGTCCTTATA TTGTAGTAGG AGCTTTTGTT
GTTGGCATGG TACTCACGCC GCCCGATATT ATCTCGCAGA CTATGCTAGC CGTACCAATG
CTGTTATTGT TTGAAGGTGG ACTAATCGCC GCACGTTTCT ACAGCAAAAA AGAAGATGAG
CCAGAAAACG AACAAGCTGA GAATTAA
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| Protein sequence | MSQQQPLISH LLELRNKLLR AIGSVLLVFI TIVYWANDIY HYIALPLMRS LPETGSMIAT
DVAAPFFAPF KLTLVLAFFI AIPYVLYQVW SFVAPGLYKH EKRLVVPLLA SSTLLFYLGI
AFAYYIVFPV VFGFFTSVVP DGVQVATDIS SYLSFILKLF FAFGLAFEIP VAVVLLCWAG
VTTPDELRQK RPYIVVGAFV VGMVLTPPDI ISQTMLAVPM LLLFEGGLIA ARFYSKKEDE
PENEQAEN
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