| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0466 |
|---|
| Symbol | |
|---|
| ID | 4277079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 533177 |
|---|
| End bp | 534190 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638133224 |
|---|
| Product | delta-aminolevulinic acid dehydratase |
|---|
| Protein accession | YP_749166 |
|---|
| Protein GI | 114561653 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATATTA TTACTAGTGC CTTTCCACAG CGCAGAATGC GCCGCATGCG TAAACATGAA
TTTAGCCGTC GTTTAATGTC TGAAAATACC TTAACAGTTA ACGATCTCAT TTATCCGATG
TTCGTGTTAG AAGGTTTTCA ACGCTCAGAA AAAATTGCTT CAATGCCAGG AATTGAACGT
TTCTCGGTTG ATCTATTATT AAAAGAAGCC GCTGAACTTG TTGAACTTGG CATTCCGCTT
ATTGCACTAT TTCCAGTGAC GCCAGCAGAT AAAAAAAGTT TACTTGCAGA AGAGTCTTAC
AATCCTGATG GATTAGTACA ACGTGCAGTC CGTGAATTAA AGCAGGCATT TCCACAACTT
GGTATCATGA CGGATGTAGC TTTAGATCCG TACACGACTC ATGGTCAAGA CGGTATTATC
GATGACACTG GCTATATCAT GAATGACATC ACCACCGAGA TCCTAGTCAA GCAGGCTTTA
TCTCATGCCG CTGCAGGAGC AGATATTGTC GCGCCATCAG ACATGATGGA TGGTCGTATC
GGTGCAATCC GCCAAGCACT TGAAGAAAAT GGCTTTGTGA ATACTCAAAT CATGGCTTAC
TCCGCTAAGT ATTCATCAAG TTATTACGGT CCTTTTCGCG ATGCTGTCGG ATCGGCTAGT
AACTTAAAAG GTGGCAATAA ACACAGCTAC CAAATGGATC CGGCTAACAG CGACGAAGCA
TTACACGAAG TGGCATTAGA TATCCAAGAA GGTGCCGACA TGGTAATGGT TAAACCAGGG
ATGCCTTATT TAGACATTGT ACACCGTGTC AAAACAGAAT TAGCAGTGCC AACATTTGCT
TATCAAGTCA GCGGAGAGTA CGCCATGCAC ATGGCTGCTA TTCAAAATGG TTGGTTGGCA
GAAAAAGCCA TTGTGATGGA GTCATTACTT TGCTTTAAGC GCGCTGGAGC GGACGGTATT
CTAACCTACT TTGCCAAACG TGCTGCTCAG TGGCTTAAAG AGCAAAACTC GTAA
|
|---|
| Protein sequence | MNIITSAFPQ RRMRRMRKHE FSRRLMSENT LTVNDLIYPM FVLEGFQRSE KIASMPGIER
FSVDLLLKEA AELVELGIPL IALFPVTPAD KKSLLAEESY NPDGLVQRAV RELKQAFPQL
GIMTDVALDP YTTHGQDGII DDTGYIMNDI TTEILVKQAL SHAAAGADIV APSDMMDGRI
GAIRQALEEN GFVNTQIMAY SAKYSSSYYG PFRDAVGSAS NLKGGNKHSY QMDPANSDEA
LHEVALDIQE GADMVMVKPG MPYLDIVHRV KTELAVPTFA YQVSGEYAMH MAAIQNGWLA
EKAIVMESLL CFKRAGADGI LTYFAKRAAQ WLKEQNS
|
|---|
| |