| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0457 |
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| Symbol | |
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| ID | 4277070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 523199 |
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| End bp | 525199 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638133215 |
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| Product | fumarate reductase flavoprotein subunit |
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| Protein accession | YP_749157 |
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| Protein GI | 114561644 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.650499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTA TTTATACCGA CACCTTGGTG GTTGGCGCTG GACTAGCTGG ATTAAGAGTC
GCGATAGCCT CAAAAGAGCG CGGTCTTGAT ACCTTGGTGT TATCGCTGGT TCCCGCTAAG
CGATCGCACT CTGTAGCAGC CCAAGGTGGC ATGCAAGCCA GTTTAGCCAA TACCATAAAA
GGTGAAGGTG ATGATGAAGA CATCCATTTT CAAGATACGG TTAAAGGTTC CGATTGGGGC
TGCGATCAAG ATGTTGCTCG AATGTTTGCT CACTGTGCAC CCAAAGCGGT AAGAGAGTTA
GCTCAGTGGG GCGTTCCTTG GACTCGAGTA ACTAAAGGCG ATAGACAAGT AATTGTTAAC
GCTGAAAAAG TCACCATTAC CGAGGCCGAA GCGGCTCATG GACTCATCAA TGCGCGTGAT
TTTGGTGGTA CCAAAAAGTG GCGTACTTGC TATACCGCAG ACGGTGCAGG TCATTCTTTG
TTGTATGCTG TCGATAATAA AGCCATTTCG TTAGGCATTC CAGTGCATGA ACGGATGGAA
GCATTATCGC TTATTCATGA TGGTGAACGT TGCCACGGTG TAATCGCTCG CTGTTTAATT
ACGGGGGAAT TACGCGCTTA CATTGCTAAA TCGACCACTA TTGCCACAGG CGGATACGGA
CGAATCTATT CTGTATCAAC CAATGCCGTT ATTTGTGAGG GGATTGGCCA AGCGTTAGCG
CTAGATACCG GTATCGCGAC ATTAGGAAAT ATGGAAGCGG TACAGTTTCA TCCGACGGCT
ATCGTTCCAG TGGGGATTTT AACTACCGAA GGCTGTCGTG GTGATGGTGG TGTGCTGCGC
GATAAAGACG GTTACCGCTT TATGCCCGAC TATGAACCAG AGAAAAAAGA ACTGGCTTCG
CGAGATGTTG TGTCTCGTAG AATGACCGAA CATATGCGCA AAGGAAAAGG CGTAAATAGC
CCTTATGGGC CGCATTTATG GCTGGATATT ACCTTATTAG GTCAAAAGCA CATTGATACC
AATTTGCGTG AAGTTAAAGA GATTTGTGAA AACTTTTTAG GTATTGATCC GGTTAAAGAT
TGGATCCCAG TTCGACCTAC ACAACATTAT TCTATGGGCG GTATTCGTAC TAAAGCCAAT
GGCGAAAGCC CGCAATTATC AGGGCTGTTT AGTGTTGGAG AGGCTGCTTG TTGGGATATG
CACGGCTTTA ATAGACTCGG TGGCAACTCC CTCGCAGAAA CGGTGGTTGG TGGAATGATT
ATCGGTAAGT ATGTTGCTGA CTTTGGTGAG CAAACTAGTT TAGTCGTTGA TACTGATTTA
ATCGCCCAGT TTGGTAAGCA GTTACAAACA GAAGTTGATC AGCTTATTGA GGGTGAAGGA
ACAGAAGATC CATTTAAACT TAAAGCTTCA ATGCAAAAAA TTATGATGGA CTACGTCGGG
ATTTTCCGCA ATGGGCCTGA ACTTGAAGTG GCTGTTAACC AATTAACCGA ACTGCTTGAA
CGTTCGAAAA ACCTCGGTTT AAAGTGTAAA AAACGCCACG CTAACCCTGA ATTAGTTGAG
GCGTTAAGGG TTAAACGTAT GTTGAAAGTT GCCCTGACGG TAGCCTGCGG GGCTCATGCG
CGTACCGAAA GCCGCGGCGC GCATTCACGA GAAGATTTTC CACAGCGTAA TGACCAAGAC
TGGTTGAACC GTACCTTAAC AAGTTGGCCA GATGCTAATA GTTTACGACC AGAAATGAGT
TATGAAGCTC TTGATGTGAT GCGAATGGAA TTGCCGCCTG GTTATCGAGG CTATGGTGTT
GATAATGCGA TTGCTCATCC TGATACCCAA AAACGTCAGC AACAGGTTGA AGCTATTTTA
GCTGAATTAG GTGACGATGC AGATAGGTAT GCCAAGCAAG CGGCATTAAT GCCTTTTGAG
CTACCTGAAG AATATCAACC ACGTAATCAG CGCTTCACTG ATACTGTAGC CAAAACCGAC
GCTGAGTCTG GAGAAAAGTA A
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| Protein sequence | MKIIYTDTLV VGAGLAGLRV AIASKERGLD TLVLSLVPAK RSHSVAAQGG MQASLANTIK
GEGDDEDIHF QDTVKGSDWG CDQDVARMFA HCAPKAVREL AQWGVPWTRV TKGDRQVIVN
AEKVTITEAE AAHGLINARD FGGTKKWRTC YTADGAGHSL LYAVDNKAIS LGIPVHERME
ALSLIHDGER CHGVIARCLI TGELRAYIAK STTIATGGYG RIYSVSTNAV ICEGIGQALA
LDTGIATLGN MEAVQFHPTA IVPVGILTTE GCRGDGGVLR DKDGYRFMPD YEPEKKELAS
RDVVSRRMTE HMRKGKGVNS PYGPHLWLDI TLLGQKHIDT NLREVKEICE NFLGIDPVKD
WIPVRPTQHY SMGGIRTKAN GESPQLSGLF SVGEAACWDM HGFNRLGGNS LAETVVGGMI
IGKYVADFGE QTSLVVDTDL IAQFGKQLQT EVDQLIEGEG TEDPFKLKAS MQKIMMDYVG
IFRNGPELEV AVNQLTELLE RSKNLGLKCK KRHANPELVE ALRVKRMLKV ALTVACGAHA
RTESRGAHSR EDFPQRNDQD WLNRTLTSWP DANSLRPEMS YEALDVMRME LPPGYRGYGV
DNAIAHPDTQ KRQQQVEAIL AELGDDADRY AKQAALMPFE LPEEYQPRNQ RFTDTVAKTD
AESGEK
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