Gene Sfri_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0456 
Symbol 
ID4278154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp522446 
End bp523189 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content42% 
IMG OID638133214 
Productfumarate reductase cytochrome b-556 subunit 
Protein accessionYP_749156 
Protein GI114561643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0259997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCGA ATTCTTTGCA AACGAAAGTC GACAGGGCGG TAAATACCGA TAAAGGTTTT 
GCTCACCCTC TTTGGGCTGC TCGTGCAGAT AAACTACAAA GTTTGTCTGG TGTATTACTG 
GGGCTTTTTC TAGTGATGCA TTTGCATTTT GAGTCGAGTA TTTTGTTTGG CAAAGAAGCT 
TTCTACCAAG TAGCACAGTT TCTAGAAGGT GGCATTTTCA GTGAAACTGG CCATGGCTAT 
CCTCTGGTAA CAAAAATTTT TTCCTGCTTT ATGTTATTGA TTCTGCTGAT CCATGCGGTA 
TTTGCATTAC GGCGATTTCC TACTCAATTA GGGCAATGGC GAGCCTTACG AAATCAAATG 
CGTTTTTTAC CCCATGAAGA TACCAAAATT TGGTTTTGGC AAATGATCAC TGGTTTTTTA 
TTGTTCTTCC TCGTACCAAC GCACTTATTC ACCATGATCA CCAACCCTGA AATAGGCCCA 
CATCTTTCGG CTGAACGGGT GTATCACCTC AATGCTTGGG CTTTATATAT CCTGCTATTA 
CCTGTTGTAG CAGTGCATGC CGTATTTGGT TTATATCGCG TCGTGGTGAA ATGGGGCTTG 
GTTGAGCAAC GTTTTGCTAT GCTCAAATTT GCCAAGGTGT TGCTAGTGTA TTTAATGGTG 
CTAGGTGTGG CGAGTTTGCT GACGTATATT TTTATTGGCC GCTCTTTAGC ATTACCTGTA 
GTGCCATATG TGTCGATGTT GTAA
 
Protein sequence
MAANSLQTKV DRAVNTDKGF AHPLWAARAD KLQSLSGVLL GLFLVMHLHF ESSILFGKEA 
FYQVAQFLEG GIFSETGHGY PLVTKIFSCF MLLILLIHAV FALRRFPTQL GQWRALRNQM 
RFLPHEDTKI WFWQMITGFL LFFLVPTHLF TMITNPEIGP HLSAERVYHL NAWALYILLL 
PVVAVHAVFG LYRVVVKWGL VEQRFAMLKF AKVLLVYLMV LGVASLLTYI FIGRSLALPV 
VPYVSML