| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0452 |
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| Symbol | |
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| ID | 4278150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 516325 |
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| End bp | 519312 |
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| Gene Length | 2988 bp |
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| Protein Length | 995 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133210 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_749152 |
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| Protein GI | 114561639 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.155491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCATCAG AAAATTCAGT TAGCTTTATC CCTCATAGTT GGTTTGGGCA TTTGTATCAG
CGTGACGTAA ATGCGATCAA ATTGACGCAA GAGGGTATTA CCTTTATACC TGGCCATGGC
CAATTTTTAG CAAGATTTCG GCATAACAAT AAGCAACTTA TTATTGGGCA GTTATCATGG
CAGCAATTAG ATCACCCGCC ACTGTTTAGT GCCAGTTTAC TCGGTAACTT ATTGAGTTTT
AATGCTGCAG GTACCCATTA TCAAATTCCA TTTTTAAGTT ATTTTGCTAA ATCTCATTTT
AAGCAACAGG TCGAATTACT CTGGGCTTTA TCTCATCAAA AATCGCTGTG CGATTTGATA
TTACGAGTTG AAAAAGCCAC ATCGAGTCGG TATTTACGCC AGTCATTAGT AGACAAAATG
CGCGCTAGAA TCGAACGTGA GTACTTTCGC TGGTTCCCTT GGAGTGAAGG GGCTGAGCTA
CCCGCTAATA TACGTACCGC ATTAACTCAA TTACACGATT TTTATCACTG GAATAAAGCG
GATATAGAGC GCTTACGTGA AAGCTATATT CAATCACAGT TGCTTGCATT TGCGGGCTTT
TTTGATCATG TTGAGTCAAA TCCACTAACC AATAAACAGC GTCGAGCATG TATTATCGAT
GATGATAGTA ATCTGCTTCT CGCGGGCGCT GGAACGGGGA AAACCAGCGT AATGGTGGGC
AGAGCAGGTT ATCTAGTGAA TAGTGGTCAA GCTCAAGCTA ATGACATTCT ATTGCTTGCT
TATGGCAAAA AAGCCGCCAT GGAAATGGAT CTGCGAATTA AACATAAGCT GGGCAGTGAT
GATATTAAGG CCAGTACTTT TCACAGTTTA GGCCTGAAAA TTATTGCCGA TGTTGAAGGC
GTGAAACCTA GCTTATCAGC GTGGGTAAAT GATGAACCCG CCAAAGACAA ATGGGTGCAT
GATAGATTAG AAGTTTTGAT TAAAAATGAA TCTTATCGTA AACAACTTTT TGACTATTTT
AGTCGTTATT ATTACGTTGA AAAAAGCCCA TTCGAATTTT CAACACAAGG TGAGTATTTT
GAATATTTAA ATGATAACGA CATTCGCTCA TTGAAAGGTG AAAGGGTCAA AAGTTTTGGT
GAGTTGCATA TCGCCAATTG GCTGTTTACC AATGGCATTG AATATCAATA TGAAGCCAAG
TATGAATTTG ATGTCAGCAC GGTTGATTTT CGCCAGTATC AAGCTGATTT TTATCTACCT
GAATATGAGG TTTATATTGA ATATTATGGC ATTGATGAAG CCAATAATAC GGTTCCTTTT
ATCGATCAAG CTGCATATTT AACATCAATG GAATGGAAAC GGCAGTTACA TCATCAGCGC
CAAACCAACT GCATCGAATT ATTTTATTAT CAGCACAAGA AAAGTCAGTT AATTAATAAG
CTTGAACAAG CTTTAACGGT ATTTAAGGTT AACTATTCAC CTTTACCTGA TGAAGCGATA
TTGGCAACTC TTTATGAACT GGGACGAGTC ACTGAGCTGG CAAAATTGTT TAGCCAGCTC
ATTGGCTTGT ACAAAGCCGC TTGTATTGAC GAGGCCGGGC TGGAAAAGGT ATTTGCCAAT
GCTACCCAAA CGCGTAAAGC ATTTGAATTA CTCCAACCCA TTTTACAGCA GTATCAACAG
TATTTATCTG CTCACGGTGA TATCGACTTT GAGGACATGA TAGCCAAAGC GCTCGCATAC
CTGCAAAGTG GTCAATATGT CAGCCCATGG CAATATATCA TGGTCGATGA GTTTCAAGAT
ATTTCAGAAC CCAGAGCACG TTTAGTGCGA GCCTTGCGAG ATTCGCGCAC GAAAAAAGGT
AACAGCGATA CTTCATTATT TTGTGTTGGC GATGATTGGC AGGCTATTTA TCGCTTTAGT
GGTGCGGATG TCCGTTTAAC GACTCAATTT AAACGTTATT TTGGCCATGC CAGCGAAACG
TATTTGGATC TTACTTTTAG ATTTAATAAC CGTATCGGTG AAGTGGCTAG CGCTTTTGTG
AGTAAAAATC CGCATCAACT CAACAAAGAT ATCCATTCAT TGGTACAAGT TGCCAAGCCT
GCAGTATCAA TACTTCGTCG TGGTACCAAT GAGGGCGCAA CTAAAGATGA GCCGAGTAAC
AACGCATTAG AGCAAGTCTT AAATGCTCTG TCCGTCCGCG TTACTCAAGC TGTTGATAAG
CTTAAAGCTA AACCGACAGT ATACTTACTG GCACGTTTCT GGTTTCAGTT GCCAGATAAA
GACATGTTGC GTCAGTTAAC GGCTAAATAC CCGATGTTCG TGATTGAGTG TTTATCGTTT
CATGCTTCAA AAGGTAAAGA GGCCGATTAT GTGGTGATCA TGGGAATGAC CCAAGGCATA
CATGGATTTC CGTCGAAAAA AATAACGCCA CCTTTACTTG ATGCGTTTTT ACCTAAAGCT
GAAAATTTTG AGTTTGCAGA AGAACGACGT TTATTTTATG TCGCGCTAAC CCGTGCAAAG
CACCGAGTTT ACGTTATCGC CGATATGACC AATGTGAGCC CATTTATTGT GGAACTGATC
CAACAAGATT ATGCCGTTGA ACAACAAGAA TTTAGTACGT CTTTAGTGCA ATCCTTGTTC
GAACAAATTA ACTGTGTCCG ATGTACAACT GGGATATTAA AACCACGAGT GGGCAAGTTC
ACATCATTCT TTTCTTGCTC ACACTTTCCA TTATGCGATC ACAAAGAAGC AGGCTGTGAC
GAATGCGGCA GTCCGATGAC ACGCAAACGT TTTGTCGGTT TCAAGGTATG CCTCAATGAC
AGTTGTGCCC ATATGGCGCC GATATGTAAC GTTTGTGGCA GTGAGATGAG CTTAAGAGAA
AGTGCTAGAG GGGCTTTTTG GGGCTGCAAA AATTATCGGG GTAACAACGT GCCTAGTTGT
AGCAATACCA TTAATACAGC CAAAATATCT CCGCAACAGG TGCAGTAG
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| Protein sequence | MSSENSVSFI PHSWFGHLYQ RDVNAIKLTQ EGITFIPGHG QFLARFRHNN KQLIIGQLSW
QQLDHPPLFS ASLLGNLLSF NAAGTHYQIP FLSYFAKSHF KQQVELLWAL SHQKSLCDLI
LRVEKATSSR YLRQSLVDKM RARIEREYFR WFPWSEGAEL PANIRTALTQ LHDFYHWNKA
DIERLRESYI QSQLLAFAGF FDHVESNPLT NKQRRACIID DDSNLLLAGA GTGKTSVMVG
RAGYLVNSGQ AQANDILLLA YGKKAAMEMD LRIKHKLGSD DIKASTFHSL GLKIIADVEG
VKPSLSAWVN DEPAKDKWVH DRLEVLIKNE SYRKQLFDYF SRYYYVEKSP FEFSTQGEYF
EYLNDNDIRS LKGERVKSFG ELHIANWLFT NGIEYQYEAK YEFDVSTVDF RQYQADFYLP
EYEVYIEYYG IDEANNTVPF IDQAAYLTSM EWKRQLHHQR QTNCIELFYY QHKKSQLINK
LEQALTVFKV NYSPLPDEAI LATLYELGRV TELAKLFSQL IGLYKAACID EAGLEKVFAN
ATQTRKAFEL LQPILQQYQQ YLSAHGDIDF EDMIAKALAY LQSGQYVSPW QYIMVDEFQD
ISEPRARLVR ALRDSRTKKG NSDTSLFCVG DDWQAIYRFS GADVRLTTQF KRYFGHASET
YLDLTFRFNN RIGEVASAFV SKNPHQLNKD IHSLVQVAKP AVSILRRGTN EGATKDEPSN
NALEQVLNAL SVRVTQAVDK LKAKPTVYLL ARFWFQLPDK DMLRQLTAKY PMFVIECLSF
HASKGKEADY VVIMGMTQGI HGFPSKKITP PLLDAFLPKA ENFEFAEERR LFYVALTRAK
HRVYVIADMT NVSPFIVELI QQDYAVEQQE FSTSLVQSLF EQINCVRCTT GILKPRVGKF
TSFFSCSHFP LCDHKEAGCD ECGSPMTRKR FVGFKVCLND SCAHMAPICN VCGSEMSLRE
SARGAFWGCK NYRGNNVPSC SNTINTAKIS PQQVQ
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