| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0449 |
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| Symbol | |
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| ID | 4278147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 513184 |
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| End bp | 513699 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133207 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_749149 |
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| Protein GI | 114561636 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCCTC ATCATTACCC AACCTTTGCC TTAGATGACA TTGCAAACTT ACATGAATCT
GCCCAAGTTG AATTTAAGTT AGCAGGTGGA AGAGATGGTA ATGGAATGTT GCCCGAAGGT
ATGTGGGAAA GCTACAGCGC TTTTGCCAAC ACCTTAGGCG GGGAAATTAT TTTAGGGGTA
AAAGAGCAGC AAGGTGACTT TACGATTGAG GGAATTATTA ATCCGATGCC GATGCTCAGT
GAAATTTGGG CAATTTTACA TGACCCAAAA AAAATCAGTC ACAATATTTT AGCGCCTACC
GACGTACAAA TTATCGAAAT TATGGCTAAA AAGCTGATTC GTATCCATGT GCCCTGCGTG
GATGTAAAAC TCAGGCCCAT CTATGTTGGC ACCGATCCTT ACAGCGGTAC CTATTTTCGA
GTGGGCGATG CCGATATGCA TGCGAGCCGT GAGCAAGTTG AACAAATGAG CTTAAAAGCC
GGTATCGATT TGAAGCTAAA GCAACTGAAG CAGTAA
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| Protein sequence | MSPHHYPTFA LDDIANLHES AQVEFKLAGG RDGNGMLPEG MWESYSAFAN TLGGEIILGV
KEQQGDFTIE GIINPMPMLS EIWAILHDPK KISHNILAPT DVQIIEIMAK KLIRIHVPCV
DVKLRPIYVG TDPYSGTYFR VGDADMHASR EQVEQMSLKA GIDLKLKQLK Q
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