| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0448 |
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| Symbol | |
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| ID | 4278146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 512464 |
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| End bp | 513204 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133206 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_749148 |
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| Protein GI | 114561635 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGC AATTGCCTAA AGCTTCGATG ATCCAATATC AGCGCCTACA ACCTTTTAGC
GCGATTAGTT TTGATTTAGA CGATACACTC TACAATAATC TTCCTTATGT AATACATGCC
AGTGAGCAGC TGTTCTCGTT AATAAATCAA ATCTATCCTG CCACCACAAC ATGGGACGCT
GCTCAATGGC AGCAACTCAA ACATGCACTG TTCAAACTAC ATCCAGAGTT AGCTCATGAT
ACCAGTGCAG CGCGCTACGC CATGTTACAT CAAGGTTTAT TACACTTTGG TTATAGTGAG
ACAGAAGCCA GCCAAGGTGC ACAAGATGGC ATGACATGTT TTCATCATCA TCGTAGTAAT
TTTACTGTTG ATGAGAGCGT GCTGGAGTTA CTAGAACGTT TAAGCCAACG TTACCAACTT
ATTGGTATTA CTAATGGTAA TGTCGACACC CAGCGCATCG GGTTAGATAA AGTGATGCAA
TTTGTGCTAC ATCCTGGTCA TGGGGTTAAA ATGAAACCTG CTGCCGACAT GTTTAGCCTT
GCTTGTCGTC AATTAGATAT TAAGCCGTCG GCGTTATTGC ATGTGGGCGA TCATCCGTTG
TCTGATATCG CTGGAGCTAA AATGGCGGGC TGTCAAAGTG CGTGGCTAAA CCCATGTATG
CAGCAACGGC ATAAAAAGGC GCAACCGGTA TTACCGCATA TCGAGATTAA CCAATTGGAT
TTACTGCTTC AGTTGCTTTA G
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| Protein sequence | MTLQLPKASM IQYQRLQPFS AISFDLDDTL YNNLPYVIHA SEQLFSLINQ IYPATTTWDA
AQWQQLKHAL FKLHPELAHD TSAARYAMLH QGLLHFGYSE TEASQGAQDG MTCFHHHRSN
FTVDESVLEL LERLSQRYQL IGITNGNVDT QRIGLDKVMQ FVLHPGHGVK MKPAADMFSL
ACRQLDIKPS ALLHVGDHPL SDIAGAKMAG CQSAWLNPCM QQRHKKAQPV LPHIEINQLD
LLLQLL
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