Gene Sfri_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0446 
Symbol 
ID4278144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp510731 
End bp511471 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content40% 
IMG OID638133204 
Producthypothetical protein 
Protein accessionYP_749146 
Protein GI114561633 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACA TTACCTCAAA AGTCAGTTTG ACTAATGTGG CCGCTGACAA TACGGTTAGC 
AGTGAGCAAG CAAAAGATAT TAATTCAATT GGACAAGATC TTGGCATCGA CATGATGGCG
AGCCTGCAAC AAGCACCGTT TGATGAAATG TTGATCCGCG AATATTTATT GGATAATCCT
GATTTTTTTA ATCGTTATCC TGAGTTATTA GTTGCTATGC GTGTACCGCA TGCGGAACGT
GGCGCGGTAT CATTAGTTGA ACGTCGACAA GAGCTGTTAC GTCAACGTGT TAGCCAGCTT
GAAGAAGAAA TTACCTCGCT AATGAATATT GCCACTCATA ATGAGAAAAT ATTCAAATTT
AATACCGAAT TGTCGTTTAA AATGCTTGCG AGCCAAGATT TAGGTGAGCT GCGTTTAGTG
TTGTCAGAAG GATTAAAAAA CGAGTTTGGT TTTAGTCATG TCAGGTTAAT TACTGTGCAC
GATATTGACA GCGAATTAGC TAAAATTTGG CGTCATCGCG TCCAAAGTGG TTATTATTTT
GGTCGGTTAA CTCAATCAGA ATCTAAGCGT TTGTTTGGTA GTGAAGTTGG CTCTGTGGCG
TTAACTAAAT TATCTGATGA AAATGGCCAA GTGATATTTG CTATAGCCAG TAATGACCCA
ACGCATTTCC ACCCCGATAT GGACTCATTG TTATTCAGCC AATTGCGTCG TTTATTAGAC
CATATGTTGC CGAAAATGTA A
 
Protein sequence
MSDITSKVSL TNVAADNTVS SEQAKDINSI GQDLGIDMMA SLQQAPFDEM LIREYLLDNP 
DFFNRYPELL VAMRVPHAER GAVSLVERRQ ELLRQRVSQL EEEITSLMNI ATHNEKIFKF
NTELSFKMLA SQDLGELRLV LSEGLKNEFG FSHVRLITVH DIDSELAKIW RHRVQSGYYF
GRLTQSESKR LFGSEVGSVA LTKLSDENGQ VIFAIASNDP THFHPDMDSL LFSQLRRLLD
HMLPKM