| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0439 |
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| Symbol | |
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| ID | 4278137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 503525 |
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| End bp | 504244 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133197 |
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| Product | uroporphyrinogen III synthase HEM4 |
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| Protein accession | YP_749139 |
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| Protein GI | 114561626 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCT TGTTAACGCG CCCACAAGGG CGCAATCAAG CAATGGAAGA GCAACTCTCG
CTGCGAGACG TTGCTTATCT TGTTACTCCG CTATTATCGG TTGTAGAAAC CACAGAACAA
CTCAATCCTA CCCACTTAAA TAACACTGAC AACTTACTGT TTATTAGTAG CAATGCAGTG
GACTTTGCCG CACAAAAACT GCAACAGCAA TTTCCGACTC ACTGTCGTTA TTTTGCTGTA
GGCCAAGCTA CGGCAGATAG TCTAGCTCAA TATAATATCA ATGCTTTTAC CTCACCAGAA
CACAGTCAAG ATAGCGAAGG ATTATTGTCG CTAGCCCAAT TACAAGATGT CGATAAACAG
TCATTTATTA TTGTTCGGGG TTTAGGCGGA CGAGAAACAC TTGCAGAGCA ATTACAGCTG
CGAGGCGCCA ATGTGAACTA TTGGCAAGTC TACCAACGAG CAATACCAAA CCTTGACGGT
AAAGCGATAA CTCAACAGTG GAAATCGTTT GGAATTGACA CCATTGTCGT CACCAGCGGT
GAAATATTAT CCAACTTAGT TGAGCTTGTA CCAAAAGAAT TATTTGCATG GCTACGTGCA
TGTCATATCA TAGTCCCCAG TAATCGCGTC GAATTACAAG CAAAAGCAAT GGGCTTAAGC
CATATCTCCA ATGCAAATGG AGCAAATACT CAAGCTATAC TAGCGAGTCT TGCGTTATAA
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| Protein sequence | MKVLLTRPQG RNQAMEEQLS LRDVAYLVTP LLSVVETTEQ LNPTHLNNTD NLLFISSNAV
DFAAQKLQQQ FPTHCRYFAV GQATADSLAQ YNINAFTSPE HSQDSEGLLS LAQLQDVDKQ
SFIIVRGLGG RETLAEQLQL RGANVNYWQV YQRAIPNLDG KAITQQWKSF GIDTIVVTSG
EILSNLVELV PKELFAWLRA CHIIVPSNRV ELQAKAMGLS HISNANGANT QAILASLAL
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