Gene Sfri_0432 details

Gene Information

• Locus tag: Sfri_0432
• ID: 4278409
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 477619
• End bp: 478221
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638133190
• Product: OmpA/MotB domain-containing protein
• Protein accession: YP_749132
• Protein GI: 114561619
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.161803
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATATT TGATAATTTT ACTCGCATTG ATTACAACAG GTTGTTCAGT AAACGATATT 
GTCGAGTCTA ATGCTTCTAC ACAACAAAAT TTTGATCTTG CCGACAGTGA TCGTGATGGT 
GTGATAATGG CCAGAGAGCG TTGTGCGAGC ACGCTCATTG GCGCTGCTGT CGACAACTAT 
GGTTGTGGTA GCATCAAAGA TATCAATGAA CGCCAAGACT TAAAAATCCT TTTTAGTAAT 
AATTCCGTGG TTATCGAACC TCAGTATTAT AACCAAATTG AACGCGTCGC TAATGTTATG 
ACAACCTACC CTACCACTAA GGTAACGATT GAAGGTCATA CAAGTAAACG TGGTAGCTAT 
GAGCTTAATT TAGCGTTATC TCAAAAACGC GCTAAAGCGG TTATTGAAGT GTTAGAAAAC 
ACATTTGGTA TCGATCCAAG CCGTCTAAAC GCGACGGGTT ATAGTTTTGA TCGCCCTATC 
GATAACAGTG GTACACCAGA AGCAGAAGAA CGTAATCGCC GTGTGGTAGC GGAAGTCACA 
GCCGATGACA CCATTCCAGA AATGAGATGG AATATCTACA CAGTTGATGA GCAGATTGAC 
TAA 

 

Protein sequence

MKYLIILLAL ITTGCSVNDI VESNASTQQN FDLADSDRDG VIMARERCAS TLIGAAVDNY 
GCGSIKDINE RQDLKILFSN NSVVIEPQYY NQIERVANVM TTYPTTKVTI EGHTSKRGSY 
ELNLALSQKR AKAVIEVLEN TFGIDPSRLN ATGYSFDRPI DNSGTPEAEE RNRRVVAEVT 
ADDTIPEMRW NIYTVDEQID