| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0426 |
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| Symbol | |
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| ID | 4278403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 467208 |
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| End bp | 468350 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638133179 |
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| Product | alanine--glyoxylate transaminase |
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| Protein accession | YP_749126 |
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| Protein GI | 114561613 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACCCG TACCAACAAT TCAAGCTTTT ATGCCACCGC GCCGAATCTT AATGGGTCCT
GGCCCATCTG ACGTGTATCC CGAAGTGCTT GCGGCACAAT CAAGGCCGAC TATTGGCCAC
CTTGACCCAT TATTTGTTGG CATGATGGAT GAGCTAAAAA GCTTAATTCA ATATGCTTTT
CAAACCAAAA ACGAAATGAC CTTAGCTGTA TCTGCTCCAG GCAGTGCAGG CATGGAAACC
TGTTTTGTCA ATTTAGTTGA ACCAGGTGAA AAGGTAATCG TGTGTCGTAA TGGGGTATTT
GGTGAGCGCA TGCGCCAAAA CGTTGAGCGC GTTGGCGGTG TTGCGGTAGT CGTCGACAAT
GAATGGGGCG AACCTGTATG CCCAGATAAA GTTGAAGCTG CACTTGTCGC ACATCCTGAT
GCCAAATTTT TAGCCTTTGT ACATGCAGAA ACCTCAACGG GTGCGCTGTC GGATGCCAAA
ACATTATGCA CCTTGGCGCA ATTACATGAC TGTATCAGTA TTGTTGATGC GGTGACCTCA
TTGGGTGGCG TTGAATTACT GGTGGATGAG TGGGGCATTG ATGCCATTTA TTCAGGCAGC
CAAAAGTGCT TATCTTGTGT GCCCGGTTTA TCTCCAGTGT CATTTTCACC TAAAGCCGTT
GCTAAACTAA AAGCTCGTAC CACCCAGGTG CAAAGTTGGT TTTTAGATCA AACCTTAGTG
ATGGGTTATT GGGGTAATGG CAATGGCGCT AAGCGCAGCT ATCATCATAC TGCACCAGTT
AATGCATTAT ATGCCCTACA TGAGTCTTTA CGTTTGTTAG CCAATGAAGG GCTCGAAAAT
GCCTGGGCAA GACACCGTAA AATGCATCTG TTATTACGCG ATGGATTAAC CAAACTTGGA
TTGAAATTTG TGGTTGAAGA AGCGTCTCGT TTACCGCAAC TTAATACCGT TTATATTCCA
GATGGTGTTG ATGACGCTGC AGTGCGTAAG CATTTATTGG AAGAATATAA TTTAGAAATT
GGTGCAGGCT TAGGCGCTTT AGCGGGTAAA GCATGGCGCA TCGGCTTAAT GGGCTATGGT
GCCCGTCGTG AAAACGTCTC CCTTTGCTTA CATGCACTAG AAGAGTCTCT TAACCAGAAC
TGA
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| Protein sequence | MLPVPTIQAF MPPRRILMGP GPSDVYPEVL AAQSRPTIGH LDPLFVGMMD ELKSLIQYAF
QTKNEMTLAV SAPGSAGMET CFVNLVEPGE KVIVCRNGVF GERMRQNVER VGGVAVVVDN
EWGEPVCPDK VEAALVAHPD AKFLAFVHAE TSTGALSDAK TLCTLAQLHD CISIVDAVTS
LGGVELLVDE WGIDAIYSGS QKCLSCVPGL SPVSFSPKAV AKLKARTTQV QSWFLDQTLV
MGYWGNGNGA KRSYHHTAPV NALYALHESL RLLANEGLEN AWARHRKMHL LLRDGLTKLG
LKFVVEEASR LPQLNTVYIP DGVDDAAVRK HLLEEYNLEI GAGLGALAGK AWRIGLMGYG
ARRENVSLCL HALEESLNQN
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