| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0422 |
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| Symbol | |
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| ID | 4278399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 461286 |
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| End bp | 462953 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638133175 |
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| Product | acetolactate synthase 2 catalytic subunit |
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| Protein accession | YP_749122 |
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| Protein GI | 114561609 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGGCG CGGATGCAGT AATCAAAGTA CTAGCAGCAC ATGGTGTGAC AACCGTATTT
GGTTATCCTG GTGGGGCGAT TATGCCAATC TATGACGCCC TTTACGGCGG TCCTGTGGAA
CACTTGCTTA GCCGTCATGA ACAAGGTGCC GCGTTTGCTG CCGTAGGATA TGCTCGTGCG
AGTGGTAAAA CAGGGGTGTG TTTTGCAACA TCAGGCCCAG GGGCCACTAA TTTAATCACC
TCACTTGCCG ACGCTTTACT TGACTCGGTG CCGTTAGTTG CCATAACGGG CCAAGTGTCT
ACCAGTGTTA TCGGCACTGA CGCATTCCAA GAAATCGATG TATTAGGCAT GTCGTTGTCA
TGCACCAAAC ACAGTTTTAT GGTCACCGAC ATCAATGAGC TTATTCCCAC CTTATATCGC
GCTTTCGAAA TTGCCGCCGA AGGACGTCCT GGTCCGGTGT TAGTAGATAT ACCCAAAGAC
ATCCAACTTG CAGCATTAGA ATATAAAACT CCCCTTCAAA GTGTTGCTGA TGAATTACAG
CCTCAGGTTA ATGACTTAGA TGCCGCCGCA GAGTTAATTA AGCACGCTAA AAAGCCTATG
TTGTATGTCG GTGGTGGTGT GGGTATGGCT GGCGCCGTTG CGCATTTACG TCAGTTTATC
GACACCACAG GCATTCCATC AGTGGCGACG TTAAAAGGTT TAGGCAGTAT TGCACATGGC
ACTAAAGGTT ATTTAGGTAT GTTGGGTATG CACGGTGGCA AAGGGGCAAA CCTTGCAGTG
CAAGAATGTG ATTTATTGAT GGTGGTTGGC GCACGTTTTG ATGACCGTGT TACCGGCCGG
CTTGCGAGTT TTGCCAGTAA TGCCAAAGTG TTACATTTAG ATATCGATGC CGCCGAAATT
GGTAAATTAC GTCAAGCTGA CGTGGCGATA GCTGCTGAAC TTAGCATAGT GTTACCTGCA
TTAACGGCCG CCGTTGCTGA TACGCTAGAC ATTGCTCAAT GGCAAGCTGA TGTAGAGGAG
TTATCCCGTA AGCACCAATG GAATTACCAA CATCCGGGTG ATTTAATTTA TGCGCCAGCA
ATGTTACGCC GTTTAGCTAA TAAACTACCA GAAGACAGTG TTGTTGCTTG TGATGTCGGC
CAGCATCAAA TGTGGGTTGC ACAGCACATG TGGTTTCGTC GTCCTGAAGA TCATTTATCC
AGTGCTGGCT TAGGTACTAT GGGTTTCGGC TTACCTGCTG CTATTGGTGC CCAAGTTGCC
CGACCTGATG CGACGGTGGT CACTGTCTCT GGTGATGGTT CGTTTATGAT GAATGTTCAA
GAATTGACCA CCATTAAGCG CCGTAAATTG CCGGTAAAAA TCTTACTGAT TGATAATCAA
AAACTGGGTA TGGTTAAGCA ATGGCAACAG CTATTTTTTG AAGAACGATA CAGTGAAACA
GACTTATCTG ACAATCCTAA CTTTGTCCTT ATGGCATCAG CATTTGATAT TCCAGGTCGA
ACGATAACGC GAGCAGATCA AGTTGAGCAA GGGTTAGATG ATATGTTGAA TAGTAGCGGT
CCTTTTATGT TACATGTGTC GATTGATGAT GCTTTTAATG TATGGCCTCT AGTGCCACCG
GGTGCGAGTA ATAGTGAGAT GATGGACCAA ATGGAGAAGC AAACATGA
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| Protein sequence | MRGADAVIKV LAAHGVTTVF GYPGGAIMPI YDALYGGPVE HLLSRHEQGA AFAAVGYARA
SGKTGVCFAT SGPGATNLIT SLADALLDSV PLVAITGQVS TSVIGTDAFQ EIDVLGMSLS
CTKHSFMVTD INELIPTLYR AFEIAAEGRP GPVLVDIPKD IQLAALEYKT PLQSVADELQ
PQVNDLDAAA ELIKHAKKPM LYVGGGVGMA GAVAHLRQFI DTTGIPSVAT LKGLGSIAHG
TKGYLGMLGM HGGKGANLAV QECDLLMVVG ARFDDRVTGR LASFASNAKV LHLDIDAAEI
GKLRQADVAI AAELSIVLPA LTAAVADTLD IAQWQADVEE LSRKHQWNYQ HPGDLIYAPA
MLRRLANKLP EDSVVACDVG QHQMWVAQHM WFRRPEDHLS SAGLGTMGFG LPAAIGAQVA
RPDATVVTVS GDGSFMMNVQ ELTTIKRRKL PVKILLIDNQ KLGMVKQWQQ LFFEERYSET
DLSDNPNFVL MASAFDIPGR TITRADQVEQ GLDDMLNSSG PFMLHVSIDD AFNVWPLVPP
GASNSEMMDQ MEKQT
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