| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0417 |
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| Symbol | |
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| ID | 4277749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 453935 |
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| End bp | 454831 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638133170 |
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| Product | putative acyltransferase |
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| Protein accession | YP_749117 |
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| Protein GI | 114561604 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.124497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGCTGC TTTCGAAAAT CAAAGGTTCA ATCGCATTCT TATGCTATTT ATTTAATACC
ATTTTTTGGA CCATCCCTAT CTTGGCGTTC AGTATTGTTA AATTGATCCC GATTGGCATT
TGTCAAAAAA TCTGTAGCTA TATTCTCGAT AATTGCGCTA CGGCATGGAT CAGTGTCAAT
ACGATAGTAG AATCTATTTT TCATCCAATG CGTATTCATG TCACAGGCGA TCAATCTTTT
TCTGAACAAG AATGGTATAT GGTTATTGCT AACCATCAAT CATGGGTCGA CATCCTCATT
TTACAGCGAG TATTTAACCG CAAAATTCCC TTTTTAAAGT TTTTCCTCAA ACAAGAACTT
ATTTTTGTCC CGGTACTCGG CCTCGCTTGG TGGGCATTAG ACTTTCCATT TATGCGCCGT
TACAGCACAT CACAGTTACG AAAAAATCCC AAGTTGAAGG GTAAAGATAT TGAAATTACT
CGCAAAGCCT GTGAGAAATT TAAAACGAAA CCTGTGAGTA TTATGAACTT TGTTGAAGGT
ACACGTTTTA CGGAAGCTAA ACATGATAAA CAAGGGTCAC CTTTTCAGCA CCTTTTAAAA
CCTAAGGCTG GAGGAATGGC ATTCGCACTT TCTGCTATGG GAGAGCACAT TAATAAACTG
GTTAATGTCA CCATATATTA TCCTGATACC GTACCGACTT ATTGGCACTA TATTTGTGGT
GGATTATCCG AAGTAAGAGT GGACATTAAA ATCACTGATA TCCCTCAGCG TATGCGTGGC
GATTATCTGA AAGATCGCGA ATTTAAAATT GAGTTTCAAG AGCAGCTCAA TCAAATATGG
CTAGAAAAAG ACCTGCAATT ACAGAATTTT GCTTCACAAG CAAAACAAGA GGATTAA
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| Protein sequence | MSLLSKIKGS IAFLCYLFNT IFWTIPILAF SIVKLIPIGI CQKICSYILD NCATAWISVN
TIVESIFHPM RIHVTGDQSF SEQEWYMVIA NHQSWVDILI LQRVFNRKIP FLKFFLKQEL
IFVPVLGLAW WALDFPFMRR YSTSQLRKNP KLKGKDIEIT RKACEKFKTK PVSIMNFVEG
TRFTEAKHDK QGSPFQHLLK PKAGGMAFAL SAMGEHINKL VNVTIYYPDT VPTYWHYICG
GLSEVRVDIK ITDIPQRMRG DYLKDREFKI EFQEQLNQIW LEKDLQLQNF ASQAKQED
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