Gene Sfri_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0413 
Symbol 
ID4277745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp446539 
End bp446892 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content45% 
IMG OID638133166 
Productendoribonuclease L-PSP 
Protein accessionYP_749113 
Protein GI114561600 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.343212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTA CCCGACTCGA TGTTAACACT CGTATGAGCA GTATTGTGAT CCACAATAAT 
ACCGTTTATC TGTGTGGGCA GGTGGCTAAA GACAAGTTCA CCGACATTAA TACCCAAACT
ATTACCATGC TAGAAGAGGT CGAAAGCTTA CTCGCACAAT CTGGTAGTCG ACGCGATCAT
ATTTTATCAG CCACTATTTA CCTTAAAGAC ATGGCCGATT ACGATGCTAT GAATCAAGTG
TGGGACAGCT GGTTGCCTAA GGGGCATGCA CCTGCAAGAG CTTGTGTGCA AGCAGCGATT
GCCGAGCCAG AATATTTGGT TGAAATATCG GTAATAGCGG CAGTGGTAAG TTAG
 
Protein sequence
MTITRLDVNT RMSSIVIHNN TVYLCGQVAK DKFTDINTQT ITMLEEVESL LAQSGSRRDH 
ILSATIYLKD MADYDAMNQV WDSWLPKGHA PARACVQAAI AEPEYLVEIS VIAAVVS