Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0413 |
Symbol | |
ID | 4277745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 446539 |
End bp | 446892 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638133166 |
Product | endoribonuclease L-PSP |
Protein accession | YP_749113 |
Protein GI | 114561600 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.343212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATTA CCCGACTCGA TGTTAACACT CGTATGAGCA GTATTGTGAT CCACAATAAT ACCGTTTATC TGTGTGGGCA GGTGGCTAAA GACAAGTTCA CCGACATTAA TACCCAAACT ATTACCATGC TAGAAGAGGT CGAAAGCTTA CTCGCACAAT CTGGTAGTCG ACGCGATCAT ATTTTATCAG CCACTATTTA CCTTAAAGAC ATGGCCGATT ACGATGCTAT GAATCAAGTG TGGGACAGCT GGTTGCCTAA GGGGCATGCA CCTGCAAGAG CTTGTGTGCA AGCAGCGATT GCCGAGCCAG AATATTTGGT TGAAATATCG GTAATAGCGG CAGTGGTAAG TTAG
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Protein sequence | MTITRLDVNT RMSSIVIHNN TVYLCGQVAK DKFTDINTQT ITMLEEVESL LAQSGSRRDH ILSATIYLKD MADYDAMNQV WDSWLPKGHA PARACVQAAI AEPEYLVEIS VIAAVVS
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