Gene Sfri_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0410 
Symbol 
ID4277742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp444814 
End bp445431 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content40% 
IMG OID638133163 
ProductDSBA oxidoreductase 
Protein accessionYP_749110 
Protein GI114561597 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.247537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG CATTACTGAT GGCTGCTGCA CTACTGCTAG CGCCGATGGC TGCGATGGCT 
GCCGATTATA AAGAAGGTGT ACATTACACT GTGATTAATG ACGGCCCTGA AACAGCCAAA 
CCAGAAATTA CTGAGTTTTT CTCATTCTAT TGTCCGCATT GTTTTAATTT TTCTAAAACA 
GTAGTACCTA AAATTGAAGC GAACTTACCT GAAGGTGTGG CATTTAATCA GTCGCACGTT 
GAGTTTATTG GTCGTGATAT GGGCGTAGAA ATGTCTCGTG CCTTTGCGGT CGCTCAGCAG 
CTAAATGTTG AGAAAAAAAT GGATGCAGCT CTATTTACTG CTATCCACGA CAAGCGTCAG 
CAATTTACTC GCCCAGACGA TATCAGAGCA ATATTTATCG CTAATGGCGT AGATGGTAAG 
GCTTATGATG CAGCGGCAAG TTCATTTATG GTGAACGCTC AAATGTCGAA AATGAAGCGC 
GATACTGAAA ATGCTAAAAT TTCTGGTGTA CCAACATTAG TGGTTAACGG TAAATATCGC 
GTAGAAACCA GCTCGATTAA GTCTTATGAC GAATTAATTG ATATCGCATT TTACTTAACA 
TCAATGAACA AAAAGTAA
 
Protein sequence
MKKALLMAAA LLLAPMAAMA ADYKEGVHYT VINDGPETAK PEITEFFSFY CPHCFNFSKT 
VVPKIEANLP EGVAFNQSHV EFIGRDMGVE MSRAFAVAQQ LNVEKKMDAA LFTAIHDKRQ 
QFTRPDDIRA IFIANGVDGK AYDAAASSFM VNAQMSKMKR DTENAKISGV PTLVVNGKYR 
VETSSIKSYD ELIDIAFYLT SMNKK