Gene Sfri_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0407 
Symbol 
ID4277739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp441861 
End bp443342 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content44% 
IMG OID638133160 
Producthypothetical protein 
Protein accessionYP_749107 
Protein GI114561594 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTTA AGCAAGATTT CTTTGAACAA TTAGAAGGCT TTTATTCGCA AGTTTATCCT 
TTACCCATCA GTAATCCTCA TTGGCTGGGT TGGAGTGATG ACGCGGCTCA ATTAATTGGA
TTAGAAAAGC CCAATGCTGA ACTGTTGATG CAATTATCGG CCAACTATGC GGCTCCGGGT
GCCAGTTATT ACGCTCAAGT TTATAGTGGC CATCAATTTG GTGGTTATAC ACCAAGATTG
GGCGATGGTC GCTCAATTAT ATTAGGTGAA GCTATTGGTC CAAATGGGGC TTGGGATGTC
GCGCTAAAAG GCGGTGGCCC AACACCGTAT TCTCGTCAAG GTGATGGTCG GGCGGTAATG
CGCTCAGCTG TACGGGAGTT TTTAGTATCC GAAGCCCTTG CTGCGCTAAA TGTACCTACC
AGCCGTGCGT TAGCGGTTAT TGGTTCCGAT TTGCCCGTAT GGCGCGAAAG CCAAGAAACT
GCCGCTATAA CGGTACGCTT GGCTAAAAGC CACATTCGGT TTGGCCATTT TGAATATTTT
TTTCATAGCG AGCAAGGTGA TGCAGCCAAA CTGACTCAAT TAGTTAATTT TACCATTCAA
CAGCATTTTC CACATTTATC AACCGATGCC GCAGGTTACA AACAATGGTT TTATGAGGTA
GTGCAGTCTA CCGCTAAAAT GATTGCCCAT TGGCAGTCTG TTGGTTTTGC TCACGGGGTG
ATGAATACCG ACAATATGTC GATACTCGGT GATACTTTCG ATTTTGGCCC ATTTGCTTTC
TTAGACACTT TTAAAGAGGG CTTTATCTGT AATCACTCCG ATCACGAGGG GCGTTATGCA
TTTGGCCAGC AACCGGGCAT TGGATTGTGG AACCTCAAGC GTTTGGCACA AACATTAACG
CCTATTATCG AGTCTGACGA TTTAATCGCA GCGCTAAATA CGTATCAATT TGAATTAGTT
CAGCAGTATT TATTACTCAT GCGCGCTAAG TTAGGGTTTT CTCAACCAAA TCAAAGCCCA
AATGCTATTA ACGCAGAGGA ACAGGCTGAT CTCGGTAATA AAGATTTGCA GCTTGTGGGG
CAATTAACCG GATTACTTGA AACTAATCAG CTTGATTACA CCAATAGTTT ACGCCGTTTT
GGCCAGCTGG ACCCGAGTAG TGCGCATTCT AGTTTACGGG ACGATATGGT CGACCTTGCT
GGTTTTGATA CTTGGTATCA AGCTTATCAA AGCCGAGTAG GTGAAGTGGC GGATGTGAAT
GCATGGCAAT GTGAGCGTAA TAGTGCCAAC CCTAAATATA TTTTGCGCAA TTACCTCGCC
CAGGAAGCCA TTATCGCGAT TGAAGAAAAT GGCGACAACA GCAAGTTATT GCAACTTCAA
CAACTTTTAC AACGTCCTTT TGACGAACAA TCCGAGATGG AAGATTTTGC CAAACGCCCA
CCCCAATGGG GACAAGGTTT AATTATGTCT TGTAGCAGTT AA
 
Protein sequence
MQFKQDFFEQ LEGFYSQVYP LPISNPHWLG WSDDAAQLIG LEKPNAELLM QLSANYAAPG 
ASYYAQVYSG HQFGGYTPRL GDGRSIILGE AIGPNGAWDV ALKGGGPTPY SRQGDGRAVM
RSAVREFLVS EALAALNVPT SRALAVIGSD LPVWRESQET AAITVRLAKS HIRFGHFEYF
FHSEQGDAAK LTQLVNFTIQ QHFPHLSTDA AGYKQWFYEV VQSTAKMIAH WQSVGFAHGV
MNTDNMSILG DTFDFGPFAF LDTFKEGFIC NHSDHEGRYA FGQQPGIGLW NLKRLAQTLT
PIIESDDLIA ALNTYQFELV QQYLLLMRAK LGFSQPNQSP NAINAEEQAD LGNKDLQLVG
QLTGLLETNQ LDYTNSLRRF GQLDPSSAHS SLRDDMVDLA GFDTWYQAYQ SRVGEVADVN
AWQCERNSAN PKYILRNYLA QEAIIAIEEN GDNSKLLQLQ QLLQRPFDEQ SEMEDFAKRP
PQWGQGLIMS CSS