Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0407 |
Symbol | |
ID | 4277739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 441861 |
End bp | 443342 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638133160 |
Product | hypothetical protein |
Protein accession | YP_749107 |
Protein GI | 114561594 |
COG category | [S] Function unknown |
COG ID | [COG0397] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTTA AGCAAGATTT CTTTGAACAA TTAGAAGGCT TTTATTCGCA AGTTTATCCT TTACCCATCA GTAATCCTCA TTGGCTGGGT TGGAGTGATG ACGCGGCTCA ATTAATTGGA TTAGAAAAGC CCAATGCTGA ACTGTTGATG CAATTATCGG CCAACTATGC GGCTCCGGGT GCCAGTTATT ACGCTCAAGT TTATAGTGGC CATCAATTTG GTGGTTATAC ACCAAGATTG GGCGATGGTC GCTCAATTAT ATTAGGTGAA GCTATTGGTC CAAATGGGGC TTGGGATGTC GCGCTAAAAG GCGGTGGCCC AACACCGTAT TCTCGTCAAG GTGATGGTCG GGCGGTAATG CGCTCAGCTG TACGGGAGTT TTTAGTATCC GAAGCCCTTG CTGCGCTAAA TGTACCTACC AGCCGTGCGT TAGCGGTTAT TGGTTCCGAT TTGCCCGTAT GGCGCGAAAG CCAAGAAACT GCCGCTATAA CGGTACGCTT GGCTAAAAGC CACATTCGGT TTGGCCATTT TGAATATTTT TTTCATAGCG AGCAAGGTGA TGCAGCCAAA CTGACTCAAT TAGTTAATTT TACCATTCAA CAGCATTTTC CACATTTATC AACCGATGCC GCAGGTTACA AACAATGGTT TTATGAGGTA GTGCAGTCTA CCGCTAAAAT GATTGCCCAT TGGCAGTCTG TTGGTTTTGC TCACGGGGTG ATGAATACCG ACAATATGTC GATACTCGGT GATACTTTCG ATTTTGGCCC ATTTGCTTTC TTAGACACTT TTAAAGAGGG CTTTATCTGT AATCACTCCG ATCACGAGGG GCGTTATGCA TTTGGCCAGC AACCGGGCAT TGGATTGTGG AACCTCAAGC GTTTGGCACA AACATTAACG CCTATTATCG AGTCTGACGA TTTAATCGCA GCGCTAAATA CGTATCAATT TGAATTAGTT CAGCAGTATT TATTACTCAT GCGCGCTAAG TTAGGGTTTT CTCAACCAAA TCAAAGCCCA AATGCTATTA ACGCAGAGGA ACAGGCTGAT CTCGGTAATA AAGATTTGCA GCTTGTGGGG CAATTAACCG GATTACTTGA AACTAATCAG CTTGATTACA CCAATAGTTT ACGCCGTTTT GGCCAGCTGG ACCCGAGTAG TGCGCATTCT AGTTTACGGG ACGATATGGT CGACCTTGCT GGTTTTGATA CTTGGTATCA AGCTTATCAA AGCCGAGTAG GTGAAGTGGC GGATGTGAAT GCATGGCAAT GTGAGCGTAA TAGTGCCAAC CCTAAATATA TTTTGCGCAA TTACCTCGCC CAGGAAGCCA TTATCGCGAT TGAAGAAAAT GGCGACAACA GCAAGTTATT GCAACTTCAA CAACTTTTAC AACGTCCTTT TGACGAACAA TCCGAGATGG AAGATTTTGC CAAACGCCCA CCCCAATGGG GACAAGGTTT AATTATGTCT TGTAGCAGTT AA
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Protein sequence | MQFKQDFFEQ LEGFYSQVYP LPISNPHWLG WSDDAAQLIG LEKPNAELLM QLSANYAAPG ASYYAQVYSG HQFGGYTPRL GDGRSIILGE AIGPNGAWDV ALKGGGPTPY SRQGDGRAVM RSAVREFLVS EALAALNVPT SRALAVIGSD LPVWRESQET AAITVRLAKS HIRFGHFEYF FHSEQGDAAK LTQLVNFTIQ QHFPHLSTDA AGYKQWFYEV VQSTAKMIAH WQSVGFAHGV MNTDNMSILG DTFDFGPFAF LDTFKEGFIC NHSDHEGRYA FGQQPGIGLW NLKRLAQTLT PIIESDDLIA ALNTYQFELV QQYLLLMRAK LGFSQPNQSP NAINAEEQAD LGNKDLQLVG QLTGLLETNQ LDYTNSLRRF GQLDPSSAHS SLRDDMVDLA GFDTWYQAYQ SRVGEVADVN AWQCERNSAN PKYILRNYLA QEAIIAIEEN GDNSKLLQLQ QLLQRPFDEQ SEMEDFAKRP PQWGQGLIMS CSS
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