Gene Sfri_0402 details

Gene Information

• Locus tag: Sfri_0402
• ID: 4278241
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 437982
• End bp: 438563
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638133155
• Product: hypothetical protein
• Protein accession: YP_749102
• Protein GI: 114561589

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGTT CAATTAGCTT AGTTGTTTCC AGTTTACTCG TGTTATTAAG CTTCGCGTTT 
TCAGCTCCTA GTTTTGCAGA CGAAGATGCT TATAACGATG CCATCACTAA TTTTAAAAAG 
GCCAATGAAA GCCGACATTT ATTTGATACG GCTTACGGTT ATGCCGTCTT CCCTACCGTA 
GCCAAAGGCG GCATCGGGAT TGGTGCCGCA TATGGTAATG GTCGTGTATA CCAAAGCGAT 
GCTTATATGG GGGATTCCAC ATTAACCCAG CTATCCATTG GTTTTCAGTT AGGCGGACAA 
GCCTATAGTG AAATTATCTT CTTTAAAGAT GCCAAAGCTT ATAATGAGTT CACCAGCGGT 
AGCTTTGAAT TTAGCGCGCA AGCGTCAGCA GTGGCAATTA ACGTTGGTGC CAATGCGCAA 
GTAGGTACCA CAGGTAATTC AGCAGGCGCA GGACAAGCAG GCAGTAATCA TGCCGCTGCA 
GCAGCCTATA TTAATGGTAT GGCGATATTT ACCGCCGCAA AGGGTGGGTT AATGTTTGAA 
GCCGCTCTTG CAGGTCAGTC GTTTACCTTT GATGGTAAGT AA 

 

Protein sequence

MKRSISLVVS SLLVLLSFAF SAPSFADEDA YNDAITNFKK ANESRHLFDT AYGYAVFPTV 
AKGGIGIGAA YGNGRVYQSD AYMGDSTLTQ LSIGFQLGGQ AYSEIIFFKD AKAYNEFTSG 
SFEFSAQASA VAINVGANAQ VGTTGNSAGA GQAGSNHAAA AAYINGMAIF TAAKGGLMFE 
AALAGQSFTF DGK