Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0399 |
Symbol | |
ID | 4278238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 433762 |
End bp | 434805 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133152 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_749099 |
Protein GI | 114561586 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTA CCACTATTTC GATTGATTTG GCCAAGAATG TATTTCAAGT CCTTGGGATG GATTGTCATG CAAAACAAGT CTTCAATAAG CGTTTAAATC GCACTCAACT GACCGAATTT ATGCTGCAAC AACCCAATTG CGATGTGGTC TTCGAGGCTT GTTATTCATC CCATTACTGG GGGCGTAAGT TTCTCGCTAT GGGGCATAAC GTTAAGCTCA TTCCTGCCCA ACATGTCACC CCGTTCGTGC GAGGCAGTAA AAATGATAAC AATGACACTA TGGCGATTTA TGAAGCCAGC TTTAGGCCTA ACATTCGTTT CGTGCCAGTG AAAACCGAAG AGCAGCAAGA GATATTGATG TTGCACCGTA TCAGGGAGCG ATTAGTAAAG GAGAAAACCG CCTGTACTAA CCAAATTAGA GGTGTCTTAG TTGATTTTGG CATTTGTTTT GCCCAAGGCT ATAAAGCGTT TGAAGTGGCC ATTTGGGACA TCATTAATGA TGCATCACAA CGTCCCATAA TCAAGCTGAT GGCAAATGAC TTCTGGGGTG AATATCAAAG TGTAAATACA CGTTTAGACA GAATTAATAC CTTGATAAAA AAGCTTATTG AGCGTGACCC TAATGGCAAA ATATTACTGA GTATTCCAGG TGTCGGCCCC ATCATCGCTT CAGCATTTGT CGCATCAATT GGCCGAGGCC AGGCTTTTAA TACCGCTAAA GAGTTGGGTG TGTGGCTGGG GTTAACTCCT AAACAATTTG CCTCTGGCCA TAGAAGTGTT AATGGCAGTA TTACCAAACG AGGCAATGGC TATTTACGCA AGCAACTTAT TCATGGTGCC AGAGCAGTCG TCAGCCACGC TAGTAAAAAA CAAGATGATT TAAACCTTTG GATAATGCAG TTAAGAAGCC GAAAAAGCAT CTGCAGTACG GTGGTTGCCA CCGCCCATAG ACTCGCCAGA CTAATATGGA TTTTATTACA AAAACAAGTG CCTTATGTTC CGCAATATGC TGCAAATCAA GGTGTAAACC ATGGTACTTG TTAA
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Protein sequence | MKVTTISIDL AKNVFQVLGM DCHAKQVFNK RLNRTQLTEF MLQQPNCDVV FEACYSSHYW GRKFLAMGHN VKLIPAQHVT PFVRGSKNDN NDTMAIYEAS FRPNIRFVPV KTEEQQEILM LHRIRERLVK EKTACTNQIR GVLVDFGICF AQGYKAFEVA IWDIINDASQ RPIIKLMAND FWGEYQSVNT RLDRINTLIK KLIERDPNGK ILLSIPGVGP IIASAFVASI GRGQAFNTAK ELGVWLGLTP KQFASGHRSV NGSITKRGNG YLRKQLIHGA RAVVSHASKK QDDLNLWIMQ LRSRKSICST VVATAHRLAR LIWILLQKQV PYVPQYAANQ GVNHGTC
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