Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0390 |
Symbol | |
ID | 4278230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 419447 |
End bp | 420289 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133144 |
Product | hypothetical protein |
Protein accession | YP_749091 |
Protein GI | 114561578 |
COG category | [R] General function prediction only |
COG ID | [COG0313] Predicted methyltransferases |
TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.83739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACCAAA TGGTCGCGCT GTATATTGTT CCCACCCCAA TTGGTAATTT TGGCGACATC AGCGCTCGAG CAATAGAGGT GCTGCAACAG GTTGATTTAA TCGCCTGTGA AGACACACGC CACAGCGGAA GGTTGCTGAG CCACTTTGGT ATTGAAACCC GTAAAACGGC ATTACATGAT CATAATGAAC GTGATCGAGC GCAATGGATA GTTGAACAAT TAAATGAAGG CAAATCAATC GCGCTCATTT CTGACGCGGG TACGCCGTTA ATTTCAGACC CTGGCTACCA TTTAGTTAAC CATGTTCGTC AAGCTGGCCA CAGAGTCGTG CCTTTGCCTG GAGCATGTGC AGCGATAACA GCCTTAAGTG CATCAGGATT ACCGTCTGAT CGTTTTAGTT TTGAAGGTTT TTTACCCTCA AAAGAAAAAG CCCGTATCGA TAAACTTGAA TTTCTTAAAG AAGATCCTCG TACTTTGATA TTTTACGAAT CTCCTCACCG CATACTTTAT AGCCTTGCCG CTATTGTTGA CGTTTTAGGC GCCGATAGGC AAGTGGTAAT GGCACGTGAA GTCACTAAAA CCTTCGAAAC CTTCTTATCT GGCACCGCTG CAGAGGTATT AGCGCTGGTT GAAGCTGATG ATAATCAACA AAAAGGCGAA ATGGTCATTA TGTGCCATGG CTTTACATTA TCTGATGAAG AAGGGATTCC AGCAGTTGCA GTTGCTACGC TAAAGTTACT TTGTGAAGAA TTACCGCTTA AAAAAGCTGC CGCTATAGCA GGGCAAATCC ATGGTTTAAA GAAAAATGCC CTATATAAAT ACGGTTTAGA ACTGGATTTA TAA
|
Protein sequence | MDQMVALYIV PTPIGNFGDI SARAIEVLQQ VDLIACEDTR HSGRLLSHFG IETRKTALHD HNERDRAQWI VEQLNEGKSI ALISDAGTPL ISDPGYHLVN HVRQAGHRVV PLPGACAAIT ALSASGLPSD RFSFEGFLPS KEKARIDKLE FLKEDPRTLI FYESPHRILY SLAAIVDVLG ADRQVVMARE VTKTFETFLS GTAAEVLALV EADDNQQKGE MVIMCHGFTL SDEEGIPAVA VATLKLLCEE LPLKKAAAIA GQIHGLKKNA LYKYGLELDL
|
| |