| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0384 |
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| Symbol | |
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| ID | 4278800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 413999 |
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| End bp | 414868 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133138 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_749085 |
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| Protein GI | 114561572 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAAC TGCCACCACT GCGGGCACTA CAAATTTTTG AAGCGGCCGC AAGGCATGCT
CACTTTTCTC GGGCGGCAAC TGAGCTGTGC ATTACTCAAA GTGCGGTATC GCACCAAGTG
AGACTGCTTG AAGCACATTT TGGCGAACGA TTATTTATCC GCGAAGGTAG GCAGCTCTGC
TTAACCAGTA AAGGCAATGT GCTTTACCAT GAACTGGAGC GAATATTTAA TGAGTTGAAT
GATTTAAGCA TGCAAATCAC TGGCGATTGT AATGATCAGC TCCGCTTAGC GGTATACAGT
TCATTTGCCA TTAAGTGGCT GATTCCTCGC TTAAGCGATT TCCATCGTTT ACATCCACAG
ATTAAAATTC GCCTAGATAT GATCACCGAC GACCCACAGA TGAGTGATAG TGTTGCTGAT
ATGTTTATTA CTGGTCAAAG TGGCCAACCG GGTTATGTAC ATCGCATGTT ACACCAAGAG
AGACTGATCC CAGTGATCTG CCCGGGGCTA TTAAATACCG ACCACTCGGC GCTGAGTGTA
TTACGGCAAC ATGCATTACT CACTGTAGAT GAAGGGCCAA TAGGCTTTGA TTGGGAGCGC
TGGTTAAAGG TTAACAGCAT CAGCATAGCG GCTACGCAAC AACAGCATGT ATTTAGCCAT
GTGTTGTTAG CTATTGAAGC GGCAATTGCT GGTCAGGGGA TCGCGCTAGC GTCAGATTTT
ATGGTAGAAC GAGATATTAG TAAGGGAGCA TTAGTCGCAC TTGATTTACC CGCTATGTTG
ACTGGATTTG AATTCAATTT TAGTTGTAAA CAGCGACGTT TAAAGGAGCC CGCTATCGCT
GCATTTGTAC AATGGTTAAC CAAAAAATAA
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| Protein sequence | MRKLPPLRAL QIFEAAARHA HFSRAATELC ITQSAVSHQV RLLEAHFGER LFIREGRQLC
LTSKGNVLYH ELERIFNELN DLSMQITGDC NDQLRLAVYS SFAIKWLIPR LSDFHRLHPQ
IKIRLDMITD DPQMSDSVAD MFITGQSGQP GYVHRMLHQE RLIPVICPGL LNTDHSALSV
LRQHALLTVD EGPIGFDWER WLKVNSISIA ATQQQHVFSH VLLAIEAAIA GQGIALASDF
MVERDISKGA LVALDLPAML TGFEFNFSCK QRRLKEPAIA AFVQWLTKK
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