Gene Sfri_0383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0383 
Symbol 
ID4278799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp412955 
End bp413953 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content43% 
IMG OID638133137 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_749084 
Protein GI114561571 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAC CCATAGTTCT TAGCGGTGCG CAGCCATCAG GCGAATTAAC CATAGGTAAT 
TATATGGGCG CACTTCGTCA ATGGGTTGCC ATGCAAGATA GCCATGATTG CCTATATTGT 
GTTGTTGATT TACATGCGAT TACCGTGCGT CAAGATCCTA AAGCACTGCG TGAAGCTTGT 
TTAGATACGC TAGCCTTATA CCTTGCTTGT GGTGTTGACC CTAAAAAAAG CACCGTGTTT 
ATTCAGTCGC AAGTACCACA GCATACTCAA CTCGGATGGG TATTAAACTG TTACACCCAA 
ATGGGTGAGT TAAACCGCAT GACCCAGTTT AAAGATAAAT CGTTAAAGCA TGCCAATAAC 
ATTAACGTGG GCTTATATGG TTATCCTGTT CTAATGGCGG CAGATATTTT GCTTTATCAA 
GCCAATGAGA TCCCTGTTGG GCAAGACCAA AAGCAACATT TAGAGCTTAC CCGCGATATC 
GCAACCCGTT TTAATAATGC TTACGGCGAC ACATTTACTA TCCCAGAACC GTTTATTCCT 
GAACACGGTG CTAAGGTCAT GTCGTTGCAA GACCCGCTTA AGAAAATGTC GAAGTCTGAC 
GATAATCGTA ATAACGTTAT TGGTTTACTC GAAGATCCTA AAGCGATTTT AAAGAAAGTT 
AAAAAAGCCA TGACCGACAG CGAAGAGCCA CCAGTAGTGC GTTTTGATAT GGAACAAAAG 
CCAGGTGTGT CGAATCTACT CAGCTTAATG TCAGGGTGTA CTGGTCAGTC GATTGCGTCT 
TTAGAAGCAG AGTTTGAAGG CAAAATGTAC GGTCATTTAA AAGTGGCTAC TGGTGAAGCT 
GTCGTAGGAA TGCTTGAGCC ATTACAAGCT CGCTTTAAAG AGTACCGCGC CGACCATGCT 
TACTTAAGCC AAGTGATGGC GGAAGGTGCT GAAAAAGCTC AAGCTCGTGC AGAAGTCACC 
ATTAAAAAAG TGTATGAAAA AATTGGTCTT ATTGTGTAA
 
Protein sequence
MTKPIVLSGA QPSGELTIGN YMGALRQWVA MQDSHDCLYC VVDLHAITVR QDPKALREAC 
LDTLALYLAC GVDPKKSTVF IQSQVPQHTQ LGWVLNCYTQ MGELNRMTQF KDKSLKHANN 
INVGLYGYPV LMAADILLYQ ANEIPVGQDQ KQHLELTRDI ATRFNNAYGD TFTIPEPFIP 
EHGAKVMSLQ DPLKKMSKSD DNRNNVIGLL EDPKAILKKV KKAMTDSEEP PVVRFDMEQK 
PGVSNLLSLM SGCTGQSIAS LEAEFEGKMY GHLKVATGEA VVGMLEPLQA RFKEYRADHA 
YLSQVMAEGA EKAQARAEVT IKKVYEKIGL IV