Gene Sfri_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0354 
Symbol 
ID4277598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp381428 
End bp382207 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content48% 
IMG OID638133108 
Producthypothetical protein 
Protein accessionYP_749055 
Protein GI114561542 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATTTAG AATTTGAGCT TCTATCATGG GGCGCATGGT CGCCGGACTT TCAGACACCT 
GAAAGTTGGC TACAATGGCA ACAGCCTAAT GGCAATTTGG CGCCTAAGCC AGACTCACCG
CCATTGGCTC ACATTCCTGC CATGCAACGC CGTCGCTTTA GTCGCTTAAC TAAAATGATG
CTCACGGCCG CCTACCAATG CCAACCTGAG AATAATTGCC GCAGTATTTT TTCATCTCGC
CATGGAGAGC TCACGCGCAC CTTGGGCTTA CTCAAAGATA TCACCCAACA ACAAGCGTTA
TCGCCAATGG CTTTTAGTCA ATCAGTGCAC AATACTGCCA GTGGCATTTT CGGTATTGTT
AATAACAATA CCGCTTCGTC TACATCGATT GCCGCTGGTG AACAAACTCT CACTCAGGCA
CTTATTGAAG CCTACGCGCA ATTAGCGCAA TCGCCACAAC CTGTATTGGT TGTATTTGGT
GATGACCCGG TTCCACCGGT ATACAGTGAG TTTACTCACG AAGTCGAACT ACCTTTGGCG
TTAGGTTTGT ACCTAGCACC ATTTAATAGC AGTGCCCCAC AAGCCAAAAA TCAGCTTGCA
GACACCACTT TACAACACGA TTCGGCTCAG CGAATGACCC TTAGCGTGTC CGATCATCCG
CCCGAGCATC ACAGTCAAAA CAACATCTGC ATGAGCGAGT TAATACACCA TATTGCCAGT
GCAAAACATA TCCAAGGTAA ATTGTGCCAT TGGTATTGGT CGCTTGAACA TCATGCCTAA
 
Protein sequence
MHLEFELLSW GAWSPDFQTP ESWLQWQQPN GNLAPKPDSP PLAHIPAMQR RRFSRLTKMM 
LTAAYQCQPE NNCRSIFSSR HGELTRTLGL LKDITQQQAL SPMAFSQSVH NTASGIFGIV
NNNTASSTSI AAGEQTLTQA LIEAYAQLAQ SPQPVLVVFG DDPVPPVYSE FTHEVELPLA
LGLYLAPFNS SAPQAKNQLA DTTLQHDSAQ RMTLSVSDHP PEHHSQNNIC MSELIHHIAS
AKHIQGKLCH WYWSLEHHA