Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0348 |
Symbol | |
ID | 4277156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 377745 |
End bp | 378137 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638133102 |
Product | thioester dehydrase family protein |
Protein accession | YP_749049 |
Protein GI | 114561536 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGT CAGAATTACC GCATATTGTT AGCCATGAAG GCGATAATAA TCTCTATCAA TGGCGTTTAT TTGTCAGTGC AGATTTAGCC TTTTTCGATG GCCATTTTCC TCAGCAAGCC GTATTACCAG GTGTCACCCA ATTGGATTGG GCGGTTAAAC TTGGCTGTGA GGCATTTGGT TATTCAGCCC AAGTGGCCAC ATTAGAAGTG CTTAAATTTC AGCAACTCAT TTTGCCCGAT ACCTATGTTG ATTTGATCAT TGAACATCAA CCTCAAAAAG CAAAACTGAT CTTTAGCTAT CGAGATCAAG ATAAACGGTT TGCCTCTGGC CGTATTGCGC TTAAGCCTGC AGTAGTCACT ACTGCGCCGA TTGCCAATGA GATTGCCTCA TGA
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Protein sequence | MIKSELPHIV SHEGDNNLYQ WRLFVSADLA FFDGHFPQQA VLPGVTQLDW AVKLGCEAFG YSAQVATLEV LKFQQLILPD TYVDLIIEHQ PQKAKLIFSY RDQDKRFASG RIALKPAVVT TAPIANEIAS
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