Gene Sfri_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0348 
Symbol 
ID4277156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp377745 
End bp378137 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content42% 
IMG OID638133102 
Productthioester dehydrase family protein 
Protein accessionYP_749049 
Protein GI114561536 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGT CAGAATTACC GCATATTGTT AGCCATGAAG GCGATAATAA TCTCTATCAA 
TGGCGTTTAT TTGTCAGTGC AGATTTAGCC TTTTTCGATG GCCATTTTCC TCAGCAAGCC
GTATTACCAG GTGTCACCCA ATTGGATTGG GCGGTTAAAC TTGGCTGTGA GGCATTTGGT
TATTCAGCCC AAGTGGCCAC ATTAGAAGTG CTTAAATTTC AGCAACTCAT TTTGCCCGAT
ACCTATGTTG ATTTGATCAT TGAACATCAA CCTCAAAAAG CAAAACTGAT CTTTAGCTAT
CGAGATCAAG ATAAACGGTT TGCCTCTGGC CGTATTGCGC TTAAGCCTGC AGTAGTCACT
ACTGCGCCGA TTGCCAATGA GATTGCCTCA TGA
 
Protein sequence
MIKSELPHIV SHEGDNNLYQ WRLFVSADLA FFDGHFPQQA VLPGVTQLDW AVKLGCEAFG 
YSAQVATLEV LKFQQLILPD TYVDLIIEHQ PQKAKLIFSY RDQDKRFASG RIALKPAVVT
TAPIANEIAS