Gene Sfri_0347 details

Gene Information

• Locus tag: Sfri_0347
• ID: 4277155
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 375928
• End bp: 377748
• Gene Length: 1821 bp
• Protein Length: 606 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638133101
• Product: glycosyl transferase family protein
• Protein accession: YP_749048
• Protein GI: 114561535
• COG category: [M] Cell wall/membrane/envelope biogenesis; [R] General function prediction only
• COG ID: [COG0463] Glycosyltransferases involved in cell wall biogenesis; [COG4261] Predicted acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCTAA CCTTGGTTAT CCCCAATTAC AATCATCATA TTGCCATTGA ACAAACCTTA 
ACTGACTTGG CAAAATTCAA TCTGCCATGT TATTTGGTTG ATGATGGTAG CCAAGATGAA 
ACCCGTTATA TTTTGCAAGC CATGGCAGAA AAATTTAGCT GGGTAACGCT CATTAACCAT 
CCGTTTAATC GCGGTAAAGG CGCGGCAGTG ACCAGCGGCC TACGCCAAGC ATACCGCGAT 
GGTTTTAGCC ATGTATTACA GGTTGATGCT GATGGACAAC ATAATTTAGA CGATATTCCG 
TTAATGATAT CGACTGCAGA ACAACAGCCA CAGGCATTAA TATCTGGCCA ACCCATTTAT 
GATGACTCGG TGCCTAAAGG ACGTTTATAC GGACGTTACA TCACCCATTT TTGGGTATGG 
GTTGAAACCT TAAGTCTCGA CATTCAAGAT TCTATGTGTG GTTTTCGGGT TTATCCATTA 
GAGGCTACCG AACAGTTATT AAGCCAGCAA GCACTGGGTG AACGGATGGA CTTTGATATT 
GAAATCATGG TCAAACTGCA CTGGCAAGGC ACTCCGGTGG TTCATGTTCC GACCAAAGTA 
ATCTACCCGG AAGACGGTAT TAGCCACTTT CAAGGCTTGC AAGACAATGT GCGCATTAGC 
TGGATGCACA CTAAATTATT TTTTGGTATG TTGACTCGTT TGCCACAAAT TCTGAATAAA 
AATACCCCGC ATCAACATTG GTCATCAATG GGAGAGCGTG GCAGTTATTG GGGCATAAAA 
TTACTGGCTG AATGTTATCG CTTAGGTGGC CACTGGTTAT GCCGAGCGAT TATGTATCCG 
GTGATTGGCT ACTTTTTTCT AACCGGTGCT TCAGCTCGTC AAGCATCGAT GAATTTTCTA 
GCCCGAGTGC AGCAACAAGT TCCAGATCAT CCAGATTTAC ATCAACCCAC CCAGTGGCGC 
GACAGCTTAA ATCACTTTAT TGCTTTTGGT AATGCAGCTC TGGATAGGAT CGATGCCTGG 
TGCGACCGCA TCAAACTCAA TCAAGTCGAT TTTAACGATC GTCATATTCT GGCAAACCAA 
GTGGCTTCTG GTCGAGGAGC CGTACTGATT GTGTCGCATT TAGGTAATTT AGAGCTATGT 
CGTGCGATTT CAATCCACCA GCAGAAAGTG AAAGTCAACG TTATGGTGTT GACTCAACAC 
GCCGAAAACT TTAACAAAGT ATTACAACAG CTGAACCCAC AAAGTAGTCT GAACCTTATT 
CATGTTAATG AACTTGATCC CAGTACTTCT ATGCTGTTAC AGCAAAAAAT TGATATGGGC 
GAAATAGTGG TTATTGCAGC CGACCGCACC TCATCAAACA GCCAAGGTCG GGTGGTTTAC 
CTACCCTTTC TCGGTCATGA AGCGCCGTTT CCCCAAGGAC CATTTATTCT TGCAAGCTTG 
TTAAATTGTC CGGTATACAC CATGTTCTGC ATTCGCCAAC AAGGCCGCTA TAAAGTACAT 
GTTGAACACT TAAGCGATAG CTTAAAAGGC CCGCGGGCGG GGCGCATTGC ACGCTTAACT 
GATGCAATGA AATTGTACAG TCAGCGCTTA GAGTACTTTG CCAAACAGGC ACCATTGCAG 
TGGTTTAATT TTTACGATTT TTGGCATAAA GACGAATTGA TTGATCGTCC ACTGTCGCGC 
CCCGCTACTG CTGTCAATAC GGTTACAGCA CCTAATACTA GTAGTGCACC TAATACTGGT 
AGTGCACTTA ATACAAGTGC TGCGTCAAAT ACAAATACTG CACCCGCTAA CAGCACCACT 
TCACCTAGTC AGGATAACTA A 

 

Protein sequence

MKLTLVIPNY NHHIAIEQTL TDLAKFNLPC YLVDDGSQDE TRYILQAMAE KFSWVTLINH 
PFNRGKGAAV TSGLRQAYRD GFSHVLQVDA DGQHNLDDIP LMISTAEQQP QALISGQPIY 
DDSVPKGRLY GRYITHFWVW VETLSLDIQD SMCGFRVYPL EATEQLLSQQ ALGERMDFDI 
EIMVKLHWQG TPVVHVPTKV IYPEDGISHF QGLQDNVRIS WMHTKLFFGM LTRLPQILNK 
NTPHQHWSSM GERGSYWGIK LLAECYRLGG HWLCRAIMYP VIGYFFLTGA SARQASMNFL 
ARVQQQVPDH PDLHQPTQWR DSLNHFIAFG NAALDRIDAW CDRIKLNQVD FNDRHILANQ 
VASGRGAVLI VSHLGNLELC RAISIHQQKV KVNVMVLTQH AENFNKVLQQ LNPQSSLNLI 
HVNELDPSTS MLLQQKIDMG EIVVIAADRT SSNSQGRVVY LPFLGHEAPF PQGPFILASL 
LNCPVYTMFC IRQQGRYKVH VEHLSDSLKG PRAGRIARLT DAMKLYSQRL EYFAKQAPLQ 
WFNFYDFWHK DELIDRPLSR PATAVNTVTA PNTSSAPNTG SALNTSAASN TNTAPANSTT 
SPSQDN