Gene Sfri_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0339 
Symbol 
ID4277147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp367061 
End bp367552 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content46% 
IMG OID638133093 
ProductBeta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 
Protein accessionYP_749040 
Protein GI114561527 
COG category[I] Lipid transport and metabolism 
COG ID[COG4706] Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATAG CCACTGCAAC GCCGGCGATG TTAGCGCAAG ATATAAGTAC TTTTATTCCA 
CACCGTGCAC CAATGATCTT AATTGATAAT GTCTTAGAAC ATCGCCCAGA CTGCTTAATC
ACCGCAACCC ATATTAGCCC TAATAGTGCC TATTTCGACG CCCAACTCAA TGGCGTGCCT
AATTACGTTG GCATCGAGTA TATGGCCCAA AGTATTGCAG CATTAGCGGG TGTTGAAGCC
TTACTGCGCG ACGATGATAT CCGAGTCGGT TTTTTACTCG GCACCCGCAA ACTGCAAATG
CATATCGACA CATTTACTTT AGGTGAGTCT TATCGCACTC AGGTCACTCG GCTGTACCAG
GAAGAGTCTG GATTAGCGGT ATTTGATTGC CAAATTTATC ATCACGAAAT ATTAGTGGCG
GCAGCCAATG TCAATGTATT CCAACCACAA GACACCCAAG CCTATATTGA TGAAAGCCAA
GCCGACGGTT AA
 
Protein sequence
MSIATATPAM LAQDISTFIP HRAPMILIDN VLEHRPDCLI TATHISPNSA YFDAQLNGVP 
NYVGIEYMAQ SIAALAGVEA LLRDDDIRVG FLLGTRKLQM HIDTFTLGES YRTQVTRLYQ
EESGLAVFDC QIYHHEILVA AANVNVFQPQ DTQAYIDESQ ADG