Gene Sfri_0333 details

Gene Information

• Locus tag: Sfri_0333
• ID: 4277141
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 361356
• End bp: 361850
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638133087
• Product: thioesterase domain-containing protein
• Protein accession: YP_749034
• Protein GI: 114561521
• TIGRFAM ID: [TIGR02447] thioesterase domain, putative

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.117477
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGATA TTTCATTCAC AGAAGCGCAA TCAGATGCCA AGGTAACAGC TTTACTGCAG 
ACCTTGTGTG AAACTTGGCA CAGTACGATT CCTGTTAGTC AATTTATGAA CATTAAACCA 
GTGTTGTTTA ATGGCGATAG CCTACAAGTC ACAGCACCTT TAGAGCCCAA CGTTAATTTA 
CATCACACCA TGTTTGCTGG CAGCATTTAT ACTTTAATGA CGTTAACCGG CTGGGGAATG 
GTGTGGTTAC AGCAGCAATT ATCACAGGCT CACGGTGATA TCGTGTTAGC TGATGCAAAA 
GTCAGATATT TAAAACCGGT GACTAAACAG CCTTATGCCA AAGTTATTTG GCCCTATACT 
GATTTGAATC CATTAAACCG AGGCCGACGA GTAAAAATCA CTTTAGAAGT GGCGTTATAT 
TGTGATGACA TTATGTGTGC TACGTTTACC GGGCAATTTG TGTCTTTACC GCCAAAAAAT 
ATTAGCATTG ATTAA 

 

Protein sequence

MLDISFTEAQ SDAKVTALLQ TLCETWHSTI PVSQFMNIKP VLFNGDSLQV TAPLEPNVNL 
HHTMFAGSIY TLMTLTGWGM VWLQQQLSQA HGDIVLADAK VRYLKPVTKQ PYAKVIWPYT 
DLNPLNRGRR VKITLEVALY CDDIMCATFT GQFVSLPPKN ISID