Gene Sfri_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0332 
Symbol 
ID4277419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp360849 
End bp361286 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content42% 
IMG OID638133086 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_749033 
Protein GI114561520 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.241331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCAT TAATTCAACG AGTTAAACGT GCATCAGTGT CGGTAGACAA TACAATAGTC 
GGCAAAATTG ACCAAGGCTT GTTAGTATTA CTAGGCATAG AGCGCGAAGA TAATATTGAG 
AAAATGGTTA AGTTAGCTAC AAAAGTCATT AATTATCGGG TGTTTAGTGA TGAAGATGGC 
AAAATGAATC TTAATCTGGC TCAAGTCGGT GGGCAATTAT TGGTGGTGTC ACAATTTACC 
TTAGCTGCGG ATACTGGCAA AGGCTTAAGA CCCAGTTTTT CGTGCGCAGC AACCCCAGAA 
CAAGCCGATC GCCTTTATCT AGCTTTTGTC GAGTATTGTC GCCAACAAGG GGTTATGACA 
CAGACGGGGC AATTTGGTGC AGATATGCAG GTTGAGTTGG TTAATGATGG CCCTGTGACC 
TTTAATTTGC AGGTATAA
 
Protein sequence
MIALIQRVKR ASVSVDNTIV GKIDQGLLVL LGIEREDNIE KMVKLATKVI NYRVFSDEDG 
KMNLNLAQVG GQLLVVSQFT LAADTGKGLR PSFSCAATPE QADRLYLAFV EYCRQQGVMT 
QTGQFGADMQ VELVNDGPVT FNLQV