Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0331 |
Symbol | rbn |
ID | 4277418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 359737 |
End bp | 360699 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638133085 |
Product | ribonuclease BN |
Protein accession | YP_749032 |
Protein GI | 114561519 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.533981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAAAA AGTTTGATTA CAGCCCTATT GCGGCTTTTT TTAGTGGGAT TTGGCAGTTT CTACTCCATC TCAAACAGCG GCTTGCTGAA GACCAAATCA ATATACGAGC GGGTCATTTG GCCTATGTGA CTTTGTTGTC ACTGGTGCCT ATGTTGGCTG TCACCATGTC GATGTTATCG GCCTTTCCGG TGTTTAAAGG TATTCGCGGC AATATCGAAG GCTTTATTTA TAATAATTTT ATACCTGCGG CGGGTGATAC GGTACAAGTG CATATTAACG AATTTGTCGC TAATGCATCT AAAGGCACTT TTGTCGGTAT TATCGCCTTA GTGTTTGTTG CCATTATGCT GATTTCAGCT ATCGACAAAG CATTGAATAA CATTTGGCGG ATTACCGAAA AACGCTCATA CGTGGTGTCA TTTTCGATGT ACTGGATGGT GTTGACTCTG GGGCCTGTTC TCATAGGTGC AAGCTTAGTA GCAACGTCCT ATGTTGTGTC ATTAGAGGTT GTGGCAGGTA CTGAATTATC TGGACTAGTC CCGTGGATTG TTGAACGTTT GCCGTTGATA TTTTCTGCAG CATCGATATT ACTGTTGTAT ATGGTAGTAC CAAATAAGAA AGTGCATTTC TTGCATGCTT TATTAGGCGC AATTGTTGCT GCGGTATTAT TTGAAGCAGG TAAAAAAGGT TTTGCGTTTT ATGTCACTCA GTTTCCGAGT TATGAAGCCA TTTATGGCGC TCTGGCAGTG GTGCCCATTT TGTTTGTATG GGTATATTTA TCGTGGATGA TTGTGTTGTT AGGGGCAGAA ATTACTGCCG CTTTACCAGA GTATCTGGAG AGTTTGGCTG TTATAGCGGA AGATCTAAAA GCGGAAATAT TTGCTGAAAC GGAAGACGAG CATGTCAACA ATGTGCATGA TCCTATCGTG GTTGATAAAT CGGTTCCGTC TGATAAATCA TAA
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Protein sequence | MPKKFDYSPI AAFFSGIWQF LLHLKQRLAE DQINIRAGHL AYVTLLSLVP MLAVTMSMLS AFPVFKGIRG NIEGFIYNNF IPAAGDTVQV HINEFVANAS KGTFVGIIAL VFVAIMLISA IDKALNNIWR ITEKRSYVVS FSMYWMVLTL GPVLIGASLV ATSYVVSLEV VAGTELSGLV PWIVERLPLI FSAASILLLY MVVPNKKVHF LHALLGAIVA AVLFEAGKKG FAFYVTQFPS YEAIYGALAV VPILFVWVYL SWMIVLLGAE ITAALPEYLE SLAVIAEDLK AEIFAETEDE HVNNVHDPIV VDKSVPSDKS
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