Gene Sfri_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0329 
Symbol 
ID4277416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp358697 
End bp359344 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content40% 
IMG OID638133083 
Producthypothetical protein 
Protein accessionYP_749030 
Protein GI114561517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.14271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT GGATATCACT GGCACTATTA AGTAGCAGTT TACTGTTGAG CGGTTGTCAA 
AGCGCCTATT ACGGTGCAAT GGAAAAAGTC GGCTATCACA AACGCGACAT TATGGTCGAT 
AGAGTGCAAG AAGCAAAAGA GTCGCAAGAA GAAGCTCAAG AGCAATTTAG CTCTGCATTG 
GAAGAAATGC AGGCGCTTTT AGCATTTGAT GGTGGCGATT TAGAAGATGC TTATAACAAA 
GCTAAAGATG AATATGAGTC TGCTCAATCT GCTGCTGATG AAGTTAGTCA TCGCATCGAA 
AAAGTCGAAG ATGTCGCGGA TGCTTTATTT GATGAATGGC AAACTGAAAT CGAAGAAATA 
AGCAAAGCCA GTTTACGCCG TAACAGCACC AGCAAGCTCA ATGAAACCAA ACGTTCATAT 
AAAACTCTAG TCAGAAGTAT GCGCCGGGCA GAAGCTAAAA TGCCACCCAT TTTAACCGCA 
ATGAAAGATA ATATGCTGTA TTTAAAACAT AACCTAAATG CGCAGGCTAT TGGTGCCATT 
AAAGGTGAGT TTGCCAATTT ACAGACAGAT ATCTCTAGCT TGATTAAAGA AATGAACAAA 
TCGATTGCCG AATCGAACAA GTTTATAGCC TCAATGGAAC AAGGTTAA
 
Protein sequence
MKKWISLALL SSSLLLSGCQ SAYYGAMEKV GYHKRDIMVD RVQEAKESQE EAQEQFSSAL 
EEMQALLAFD GGDLEDAYNK AKDEYESAQS AADEVSHRIE KVEDVADALF DEWQTEIEEI 
SKASLRRNST SKLNETKRSY KTLVRSMRRA EAKMPPILTA MKDNMLYLKH NLNAQAIGAI 
KGEFANLQTD ISSLIKEMNK SIAESNKFIA SMEQG