Gene Sfri_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0325 
SymbolglnA 
ID4277412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp355472 
End bp356881 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content42% 
IMG OID638133079 
Productglutamine synthetase 
Protein accessionYP_749026 
Protein GI114561513 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000686666 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTTG AATCAGTTTT AAAACAACTT GTAGAGTTAG AAGTTAAGTT TGTAGACTTA 
CGCTTTACCG ACACTAAAGG TAAAGAGCAG CATGTTTCTA TTCCTTCTCA TCAAGTAGAT
GAAGATTTCT TTGAAGACGG CAAAATGTTT GACGGTTCTT CAATTGTGGG TTGGAAAGGC
ATTAATGAAT CTGACATGGT GCTAATGCCA GATCCAACCA CTTTCGTGTT AGACCCTTTC
ACTGAAGAAA CAACAGCACT TATTCGTTGT GACATTTTAG AGCCTGGTAC TATGACAGGT
TATGACCGTG ACCCACGTTC TATTGCTAAG AAAGCTGAAG CTTACCTAAT TTCTACTGGT
ATTGCTGACA CAGTATTGAT TGGTCCAGAG CCAGAGTTCT TCTTATTTGA CGATGTCCGT
TTTGGTACTG ACATGTCAGG TTGTTTCGTG AAGATTGACG CAAAAGAAGC ATCATGGAAC
TCAGCTAAGA GCTATGAAGA AGGTAACACT GGTCACCGTC CAATGGTGAA AGGTGGTTAT
TTCCCAGTTG CACCAGTTGA TTCTTCACAA GATTTACGTT CGGCAATGTG TTTAGTACTT
GAAGAAATGG GTCAAGTAGT TGAAGCGCAT CACCACGAAG TAGCAACAGC GGGTCAAAAC
GAAATCGCAA CACGTTTCAA TACGTTGACT AAGAAAGCTG ATGAAATTCA AATTCTAAAA
TACGTTGTTC ATAACATGGC ACATGCTTAT GGTAAAACAG CGACATTTAT GCCAAAACCA
ATCGTTGGTG ACAACGGTAG CGGCATGCAC GTGCATCAGT CTTTAGCTAA AGACGGCGTT
AACTTATTCG CAGGTGACAA GTATGCAGGT TTAAGTGACC TAGCGCTTTA CTACATTGGC
GGCATTATTA AGCATGCCCG TGCATTGAAT GCGTTCACTA ACCCAAGCAC AAACTCTTAC
AAGCGTTTAG TGCCACATTT TGAAGCGCCA GTAATGCTTG CATATTCTGC ACGTAACCGC
AGTGCTTCAA TTCGTATTCC AGTGGTACCA AGCCCTAAAG GCCGTCGTAT CGAAGCGCGT
TTCCCTGATC CACATGCAAA TCCATATTTA GGTTTTGCTG CATTACTAAT GGCTGGTCTT
GATGGTATTC AAAACAAGAT CCACCCAGGT GAAGCAATGG ATAAAGATCT ATATGACTTA
CCAGCTGAAG AGGCTGCTGA AATTCCACAG GTTGCGACGT CATTAGAAAA CGCACTTGAA
AATTTACAGG CTGACCATGA GTTCTTAACT AAAGGCGGCG TATTCAGCGA AGACTTTATT
CAGTCTTATA TCCAACTTAA AACGGCAGAA GCAGAACGTG TTGCACGTAC TACTCACCCA
CTTGAGTTTG AAATGTATTA CAGCTTGTAA
 
Protein sequence
MSVESVLKQL VELEVKFVDL RFTDTKGKEQ HVSIPSHQVD EDFFEDGKMF DGSSIVGWKG 
INESDMVLMP DPTTFVLDPF TEETTALIRC DILEPGTMTG YDRDPRSIAK KAEAYLISTG
IADTVLIGPE PEFFLFDDVR FGTDMSGCFV KIDAKEASWN SAKSYEEGNT GHRPMVKGGY
FPVAPVDSSQ DLRSAMCLVL EEMGQVVEAH HHEVATAGQN EIATRFNTLT KKADEIQILK
YVVHNMAHAY GKTATFMPKP IVGDNGSGMH VHQSLAKDGV NLFAGDKYAG LSDLALYYIG
GIIKHARALN AFTNPSTNSY KRLVPHFEAP VMLAYSARNR SASIRIPVVP SPKGRRIEAR
FPDPHANPYL GFAALLMAGL DGIQNKIHPG EAMDKDLYDL PAEEAAEIPQ VATSLENALE
NLQADHEFLT KGGVFSEDFI QSYIQLKTAE AERVARTTHP LEFEMYYSL