| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0324 |
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| Symbol | |
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| ID | 4277411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 353180 |
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| End bp | 354991 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133078 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_749025 |
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| Protein GI | 114561512 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000010951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTAGAGA ATTTACGTAA CATCGCCATT ATTGCCCACG TTGACCATGG CAAAACAACC
CTGGTTGACA AAATGTTGGC GCAGTCAGGA ACCCTTGCAT CTCGTGGAGA AGCTACTGAG
CGGGTTATGG ATTCTAACGA TCTTGAAAAA GAACGTGGGA TCACCATTCT GGCAAAGAAC
ACTGCCATCC AGTGGAACGA CTACCGTATT AATATCGTAG ATACTCCTGG CCACGCCGAT
TTCGGTGGTG AAGTTGAACG CGTTCTATCT ATGGTTGACT CAGTATTACT ATTGGTTGAT
GCAGTTGATG GCCCAATGCC ACAAACTCGC TTTGTAACCA AGAAAGCATT CGCTCAAGGC
CTTAAGCCAA TTGTTGTTAT CAACAAAATT GACCGTCCAA GTGCTCGTCC AGATTGGGTT
ATTGACCAAG TATTCGATTT ATTCGTTAAC TTAGGTGCCA CTGACGAACA ACTAGATTTC
CCAATCGTTT ACGCTTCGGC ATTAAATGGT TTTGCAACGT TAGATCCAGA TGTAGCGAGC
GATGATATGA CGCCGCTATT CCAAACTATC GTTGAGAAAG TTGCTTTCCC AGACGCTGAT
GCTGAAGCGC CATTCCAAAT GCAAATCTCT CAAATCGATT ATAACTCATA CGTGGGTGTT
ATCGGTATTG GCCGTATTAC CCGTGGTAGC GTTAAAACTA ACCAACAAGT GACTATTATT
GGCGCTGACG GTAAGACTCG TAACGGAAAA ATGGGCCAAG TATTAGGTTA CATGGGTCTT
GACCGTACAG AAGTGCCAAT TGCAAATGCT GGTGATATCG TTGCTATTAC AGGTTTAGGC
GAGCTTAAAA TCTCTGACAC TATCTGTGCA GTGAATGCAG TAGAAGCAAT GCCACCGTTA
ACTGTTGATG AACCAACGCT AACGATGACA TTCCAAGTAA ACACTTCTCC GTTCGCGGGT
AAAGAAGGTA AGTACGTTAC TTCACGTAAC ATTCTTGAAC GTTTACAGAC TGAATTAGTT
CACAACGTAG CACTTCGCGT TGAAGAAACA GAAAGTCCAG ACCGTTTCCG CGTATCAGGT
CGTGGTGAAT TACACTTATC GATTTTAATT GAAAACATGC GTCGTGAAGG TTATGAATTA
GCCGTATCTC GTCCAGAAGT TATTCTAAAA ACAATCGATG GTGAGCTACA TGAACCATAC
GAAACTGTAA CAGTTGACGT TGAAGAAGAA CATCAAGGTA CCGTAATTGA AAAATTAGGT
GTTCGTAAAG GCGAAATGAA AGACATGCAG CTTGATGGTA AAGGTCGTGT ACGTATCGAC
TTCGTTATCC CAAGCCGTGG CTTAATTGGT TTCCAAACCG AATTCTTAAC TGCTACATCT
GGTACTGGTC TAATTTATCA TTCATTTGAT CACTACGGTC CACACAAAGG TGGCGATATT
GGTCAACGCG CTAACGGCGT ATTGATTTCA AACGCAACAG GTAAAGCACT AACATTCGCT
CTATTTGCTT TGCAAGACCG TGGTCGTATG TTTATTGGTC ACGCTGCTGA AGTGTATGAA
GGTCAAGTAG TGGGTATTCA TGCTCGCTCT AACGATTTGA CAGTAAACTG TTTGAAAGGT
AAACAGCTAA CTAACATGCG TGCATCTGGT ACTGATGAAG CACAAGTATT GACTACACCA
ATTAACTTAA CGCTTGAGCA AGCTCTTGAA TTCATCGATG ATGATGAATT AGTTGAAGTA
ACTCCTAAGA ACATCCGTGT TCGTAAGAGA TTCTTAACTG AAAACGAACG TAAGCGTAAT
AACCGCGGTT AA
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| Protein sequence | MLENLRNIAI IAHVDHGKTT LVDKMLAQSG TLASRGEATE RVMDSNDLEK ERGITILAKN
TAIQWNDYRI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVDGPMPQTR FVTKKAFAQG
LKPIVVINKI DRPSARPDWV IDQVFDLFVN LGATDEQLDF PIVYASALNG FATLDPDVAS
DDMTPLFQTI VEKVAFPDAD AEAPFQMQIS QIDYNSYVGV IGIGRITRGS VKTNQQVTII
GADGKTRNGK MGQVLGYMGL DRTEVPIANA GDIVAITGLG ELKISDTICA VNAVEAMPPL
TVDEPTLTMT FQVNTSPFAG KEGKYVTSRN ILERLQTELV HNVALRVEET ESPDRFRVSG
RGELHLSILI ENMRREGYEL AVSRPEVILK TIDGELHEPY ETVTVDVEEE HQGTVIEKLG
VRKGEMKDMQ LDGKGRVRID FVIPSRGLIG FQTEFLTATS GTGLIYHSFD HYGPHKGGDI
GQRANGVLIS NATGKALTFA LFALQDRGRM FIGHAAEVYE GQVVGIHARS NDLTVNCLKG
KQLTNMRASG TDEAQVLTTP INLTLEQALE FIDDDELVEV TPKNIRVRKR FLTENERKRN
NRG
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