| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0319 |
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| Symbol | |
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| ID | 4277406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 347152 |
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| End bp | 348126 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638133073 |
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| Product | dehydrogenase, E1 component |
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| Protein accession | YP_749020 |
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| Protein GI | 114561507 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.779126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATTG ATCGCGAACA ATTACTGGAA GCGTACCGAC AAATGCGCAC CATACGAGAA
TTTGAAGAAC GTCTGCACAA AGAATTCACC ACAGGACAAA TACCTGGATT TGTTCACCTA
TATGCCGGTG AAGAAACATC AGCTGTAGCC GTGTGTCAGC AATTAAATAA TGAAGACCAC
ATTGCCAGTA CCCACCGCGG CCATGGCCAT TGCATTGCAA AAGGTTGTGA TGTGATGGGG
ATGATGAAAG AAATCTACGG CCGCGCAGAG GGGTTATGCG CAGGCAAAGG CGGCTCCATG
CACATTGCTG ATTTAGACAA AGGCATGCTT GGTGCTAATG GTATTGTCGG TGGTGGTGGC
CCATTAGCCT GTGGCGCAGC CTTGTCTTCT AAGGTACGTG GCACCGATGG GGTTGCAGTC
GCCTTTTTTG GCGACGGCGC GTTTAATCAA GGCACCATAC TTGAATCGAT GAACTTTGCT
TCGGTTAATC AATTACCAGT GCTATTTGTA TTGGAAGATA ACGGTTATGC CGAATCCACC
GCCAGTGCTT GGTCCATGGG AGGCCATGAT CCTGTTGCTA GAGCCGCGGG ATTTGGGATA
AAAGGAAAAA AGGTCGACGG ACATGATTAC TTTGCCGTTT ACCGCGCAGC CAAAGAAGCC
GTTGATGCGA TGCGAGCAGG CCTTGGTCCA CGCTTTATTG CCATTGAATT TACTCGTTAT
TACGGACACT TTGAAGGTGA CGCCACCACC TATCGTCCTC CTGGTGAAGT CCGTGACGAA
CGTACTTACC TCGATGCGCT AAAATTTTTC CGCGCTAGGG TCACGGGTGG CGAAATGCTA
ACCGTAGTTG AGCTAGATGC CATCGATGAT GAGGTCAAAA CACTCATTGA TGCTGCCGTC
GATGAAGCTA AAGCCGCTGA AATACCTAAT ATCGACCAAC TCACCACTGA CGTTTACGCC
AATTACTCAT TATGA
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| Protein sequence | MHIDREQLLE AYRQMRTIRE FEERLHKEFT TGQIPGFVHL YAGEETSAVA VCQQLNNEDH
IASTHRGHGH CIAKGCDVMG MMKEIYGRAE GLCAGKGGSM HIADLDKGML GANGIVGGGG
PLACGAALSS KVRGTDGVAV AFFGDGAFNQ GTILESMNFA SVNQLPVLFV LEDNGYAEST
ASAWSMGGHD PVARAAGFGI KGKKVDGHDY FAVYRAAKEA VDAMRAGLGP RFIAIEFTRY
YGHFEGDATT YRPPGEVRDE RTYLDALKFF RARVTGGEML TVVELDAIDD EVKTLIDAAV
DEAKAAEIPN IDQLTTDVYA NYSL
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