Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0315 |
Symbol | |
ID | 4277210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 344741 |
End bp | 345499 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638133069 |
Product | dihydrolipoyllysine-residue succinyltransferase |
Protein accession | YP_749016 |
Protein GI | 114561503 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00552457 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACTC TACAAGATAA AGGTGCTAAG TACCATTTGT TTGGCGATGT CACCACTGAA CCATTAACTA AGATAAGGCG AATAATCGCT AATAATGTGC TTGAGAGCTG GACGCATATA CCCCACGTGA CCCATCATGA TGAGGTAGAT ATCGGTGCCA TCGAAGCATT ACGCCATAAG CTTAATATCG AACATTCGGC TGACGTTTTG GGTGTGACTG AAGAGGCACA GATACATTTC ACATTATTGC CGTTCATTTT AAAAGCCACG ATTGAAGCAT TGAAGCTTTT CCCTGCATTT AATGCTTCGC TCAGTGACGA CGGCGAAACA CTGATGCTTA AGCACTATTA CAACCTTGGA ATTGCGGTAG ACACCTCAAA TGGTCTTCTC GTTCCGGTAA TTAAAAACGT AGACGCACTC ACACTAGAGG AGCTAGCCAT AGCATCACAA CAATTAGCTG AGCGAACTCG CGCAGGTAAA CTGACCTTTG CCGACACTGA AGGAGGCTCA TTCACGGTAA CCAGTTTAGG CCCAATGGGA GGTACGAGTT TTACGCCCAT TATTAACATG CCCGAGGTTG CCATTTTAGG AGTATCAAGA GAAATAACCA AGGTTGTGGC GCAAAATGGC CAAATTGTTA TTCGCCCTAT GTTGCCATTA TCGCTGTCCT ATGATCATCG TGTTATCGAT GGCGCTATGG CAACACGCTT CATGGTACAG CTAAAGCAAA ATCTGTCACA AGCGGAGACT TTCTGCTAA
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Protein sequence | METLQDKGAK YHLFGDVTTE PLTKIRRIIA NNVLESWTHI PHVTHHDEVD IGAIEALRHK LNIEHSADVL GVTEEAQIHF TLLPFILKAT IEALKLFPAF NASLSDDGET LMLKHYYNLG IAVDTSNGLL VPVIKNVDAL TLEELAIASQ QLAERTRAGK LTFADTEGGS FTVTSLGPMG GTSFTPIINM PEVAILGVSR EITKVVAQNG QIVIRPMLPL SLSYDHRVID GAMATRFMVQ LKQNLSQAET FC
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