Gene Sfri_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0315 
Symbol 
ID4277210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp344741 
End bp345499 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content45% 
IMG OID638133069 
Productdihydrolipoyllysine-residue succinyltransferase 
Protein accessionYP_749016 
Protein GI114561503 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00552457 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACTC TACAAGATAA AGGTGCTAAG TACCATTTGT TTGGCGATGT CACCACTGAA 
CCATTAACTA AGATAAGGCG AATAATCGCT AATAATGTGC TTGAGAGCTG GACGCATATA
CCCCACGTGA CCCATCATGA TGAGGTAGAT ATCGGTGCCA TCGAAGCATT ACGCCATAAG
CTTAATATCG AACATTCGGC TGACGTTTTG GGTGTGACTG AAGAGGCACA GATACATTTC
ACATTATTGC CGTTCATTTT AAAAGCCACG ATTGAAGCAT TGAAGCTTTT CCCTGCATTT
AATGCTTCGC TCAGTGACGA CGGCGAAACA CTGATGCTTA AGCACTATTA CAACCTTGGA
ATTGCGGTAG ACACCTCAAA TGGTCTTCTC GTTCCGGTAA TTAAAAACGT AGACGCACTC
ACACTAGAGG AGCTAGCCAT AGCATCACAA CAATTAGCTG AGCGAACTCG CGCAGGTAAA
CTGACCTTTG CCGACACTGA AGGAGGCTCA TTCACGGTAA CCAGTTTAGG CCCAATGGGA
GGTACGAGTT TTACGCCCAT TATTAACATG CCCGAGGTTG CCATTTTAGG AGTATCAAGA
GAAATAACCA AGGTTGTGGC GCAAAATGGC CAAATTGTTA TTCGCCCTAT GTTGCCATTA
TCGCTGTCCT ATGATCATCG TGTTATCGAT GGCGCTATGG CAACACGCTT CATGGTACAG
CTAAAGCAAA ATCTGTCACA AGCGGAGACT TTCTGCTAA
 
Protein sequence
METLQDKGAK YHLFGDVTTE PLTKIRRIIA NNVLESWTHI PHVTHHDEVD IGAIEALRHK 
LNIEHSADVL GVTEEAQIHF TLLPFILKAT IEALKLFPAF NASLSDDGET LMLKHYYNLG
IAVDTSNGLL VPVIKNVDAL TLEELAIASQ QLAERTRAGK LTFADTEGGS FTVTSLGPMG
GTSFTPIINM PEVAILGVSR EITKVVAQNG QIVIRPMLPL SLSYDHRVID GAMATRFMVQ
LKQNLSQAET FC