| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0314 |
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| Symbol | |
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| ID | 4277209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 343760 |
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| End bp | 344629 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133068 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_749015 |
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| Protein GI | 114561502 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000499164 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACCT CTTCTGAATA TGACTTTTGG GTCAAATTAG CTAGCCGCGC GTCAGTGGCC
ACAGCGCTGT GCCTTATTGT GATTAAGTTG ATCGCTTGGA TGTATTCGGG CTCGGCCAGT
ATGTTGGGTT CATTAACGGA TTCATTTGCA GATGCACTTG CTTCGATTGT TAACTTTATC
GCTATTCGGT ATGCCATCGT TCCCGCTGAT AAAGATCATC GTTATGGCCA TGGTAAAGCT
GAGCCGTTAG CAACGTTAGC TCAAGCGGCC TTTATTTTAG GTTCGGCGTC GTTGTTATTA
TTGTATGGCG GCGAAAAGTT AATTCATCCA GTGGCAGTCA CCAATGCTAT GAGTGGCATC
GTGGTGTCTA TTATTGCGAT AGTACTGACA TTTGCACTCG TTTTGCTGCA ACGACATGCG
TTGAAAAAAA CCAATAGCTC TTTGGTTGAG GCCGATTCAC TACATTATAA GTCTGACTTG
TTATTGAATG CTGCGGTGTT GTTTGCGCTA ATATTGGCGC AATATGGCTG GTGGTGGGCC
GATGGTCTGT TTGCGGTGTT TATTGCATTG TTTATTGGTA ATCAAGCGCT CGGTTTAGGT
TATCGTTCAA TTCAGAGTTT ACTTGACCGC GAGTTAGACA ATGAGACTCG CGACAAAATT
AAAGCGTTAG CCAAGCAAGA CCCTCGCGTT AAGGGGATTC ATGATTTACG CACTCGTCAA
GCGGGCAAAA CCACGTTCAT TCAATTGCAC ATGGAATTGG CTGGTGACTT ATCTCTGCTT
GAAGCTCATG CAATAGCAGA TAAAGCGGGT ATGACGATTA AAGCGGCGTT TGATGATGCA
GAAGTGATAA TTCACCAAGA TCCGGTTTAA
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| Protein sequence | MSTSSEYDFW VKLASRASVA TALCLIVIKL IAWMYSGSAS MLGSLTDSFA DALASIVNFI
AIRYAIVPAD KDHRYGHGKA EPLATLAQAA FILGSASLLL LYGGEKLIHP VAVTNAMSGI
VVSIIAIVLT FALVLLQRHA LKKTNSSLVE ADSLHYKSDL LLNAAVLFAL ILAQYGWWWA
DGLFAVFIAL FIGNQALGLG YRSIQSLLDR ELDNETRDKI KALAKQDPRV KGIHDLRTRQ
AGKTTFIQLH MELAGDLSLL EAHAIADKAG MTIKAAFDDA EVIIHQDPV
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