Gene Sfri_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0301 
Symbol 
ID4277196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp330238 
End bp330882 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content40% 
IMG OID638133055 
Productmethyltransferase type 11 
Protein accessionYP_749002 
Protein GI114561489 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGTCTT GTCCTTTGTG TCACCATGAA ACAGCTGCTT TTTCTCAAGA TAAAAGTCGT 
TCCTATGTCC GTTGTCCGCA ATGTTTTTTG GTATCGGTTC CTGCAGCATT TTATTTAGAT 
GAAATAGCAG AAAAAGCCCA TTATGATTGT CACAATAATG ACGTTGCCGA TCTAGGTTAC 
CAACAATTTT TATCCCGTAC TTTAACGCCA TTAATCGCGC GTATTAAACC CGGTGCAATA 
GGGTTAGATT TTGGCTGCGG AGAAGGTGCT GTATTAAGCC AAATGGCTGT AGCGCAAGGC 
ATTAAGGTGG TTAATTATGA TTTATTTTAT CACCCAGATA CTCTCGCTCT CTCTCAAAAA 
TATGATTTTG TCTGCTTAAC TGAAGTGATA GAGCACATTG CCAATGCACA GGCGTTGATG 
GCGCAATTAA GCACATTATT GTTGCCTGGC GGCATATTAG CGATAATGAC CAAACACATA 
CCCAGTTTAG ATAAGTTTAA CAATTGGTAC TATAAAATCG ACCCGACTCA TATCAATTTC 
TACTCTATAG AGACCTTCCA ATGGGTAGCA TTACAACAAG GTTGGCAGCT TGAAATTATC 
GACAGTGACG TGGTGTTTTT TCACATTCCA ACGTCGCCAG CTTAG
 
Protein sequence
MSSCPLCHHE TAAFSQDKSR SYVRCPQCFL VSVPAAFYLD EIAEKAHYDC HNNDVADLGY 
QQFLSRTLTP LIARIKPGAI GLDFGCGEGA VLSQMAVAQG IKVVNYDLFY HPDTLALSQK 
YDFVCLTEVI EHIANAQALM AQLSTLLLPG GILAIMTKHI PSLDKFNNWY YKIDPTHINF 
YSIETFQWVA LQQGWQLEII DSDVVFFHIP TSPA