| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0297 |
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| Symbol | |
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| ID | 4278572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 326840 |
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| End bp | 328045 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133051 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_748998 |
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| Protein GI | 114561485 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.169159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTCGTA ACTTATTGCC ATTGTTAATG TTTATGGTGC TTTTGAGCCC ATTAGCTATT
GATATTTATC TGCCGTCTAT GCCTGCAATG GCGTTGGAGT ACGGTGTATC TAACAGTGAA
GTACAGTCCA CCTTAGTGTT ATTTTTATTT GCAATGGGCG TAGGACAAAT TCTAATTGGC
CCGTTAGCTG ACCGTTTTGG CCGTAAACCT GTCGCGTTAT TCGGAATTGT ACTTTATGGC
ATTAGCAGTT TATTAGGTGC TTACGCGGTT GAGTTTGAAT GGTTGCAGAT AGCTCGCGTT
TTTCAAGGCT TAGCGGCATG TTCAACCTCT ATAGTGGTAT TTAGTGCGGT ACGTGACTGC
TATTCCCGCA AAGAAAGTGT GTCGATGTAC AGTTATCTAA ATGGTGCAAT TTGTGTGGTT
CCGGCACTGG CTCCAACATT TGGTGGCTTA TTAGCATTAC AGTTTGGTTG GCGTTCTACC
TTCATTTTTA TGGCTTTGTA TGCCATTTTT GTATTGTTTT TGGTAGGGTT CCGTTTTCCG
GAAACACGTC CGTTAAATAC CGACAGTACA GGGCCTTTAT ACCGTTGGAG CCGCTATAAG
CCGGTTATTG GCGACCCTCA TTTTATGTTT TATGCCAGTT GTTGCATGAT CGCGATGGCA
TCAATTTTAT GTTACGTATC TTATTCACCA GTATGGTTAA TTGGTCATTT AGGCATTTCA
GAATTAACTT TCAGCGGTTT ATTTGGCCTT AATGCTGCGG TAAATATTGC AGCGTGTTTT
GCTGCTCCAG TGTTGGTTAA GCGTATTGGT AACCGTCCGG GAGTGGTCGT GGCATTATCG
TTGATGTTGC TTGCTGCTGT TATCGAAGCC GCGATGTACT TTGCTGGCCC CCAAGAAGGA
TTAGCCGCCG CAATAGCGTT TATGGCTCCG ATGATGATTT TGTGTGTTGG CTTTGCTGTT
TTACTTGGCC CTGCAACCAG TATGGCGTTG TCGGCTTTCG GTGAGCGAGC AGGCACGGCG
ACGGCGATGT TAGGTTGTAT TCAAATGAGT GGGGCATCAA TACTGACGGC GTTGATCCAA
CTAACCGATA TACCAGCACC CTATGCGATA GCTGTTGTGA TGGGGGGCTT TAGTGCAGTA
TTGCTGATCA TTATTGCAAT GAACCGTTTA AGCCATCTGC ATCAAGAACA GTTACAACAT
GACTAA
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| Protein sequence | MRRNLLPLLM FMVLLSPLAI DIYLPSMPAM ALEYGVSNSE VQSTLVLFLF AMGVGQILIG
PLADRFGRKP VALFGIVLYG ISSLLGAYAV EFEWLQIARV FQGLAACSTS IVVFSAVRDC
YSRKESVSMY SYLNGAICVV PALAPTFGGL LALQFGWRST FIFMALYAIF VLFLVGFRFP
ETRPLNTDST GPLYRWSRYK PVIGDPHFMF YASCCMIAMA SILCYVSYSP VWLIGHLGIS
ELTFSGLFGL NAAVNIAACF AAPVLVKRIG NRPGVVVALS LMLLAAVIEA AMYFAGPQEG
LAAAIAFMAP MMILCVGFAV LLGPATSMAL SAFGERAGTA TAMLGCIQMS GASILTALIQ
LTDIPAPYAI AVVMGGFSAV LLIIIAMNRL SHLHQEQLQH D
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