| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0289 |
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| Symbol | |
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| ID | 4278564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 318154 |
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| End bp | 319662 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133043 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_748990 |
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| Protein GI | 114561477 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTAAATG ATATTGAGTT TATTAATGGT TTCTCTACTG AGTTAAGCGA CGATTATCGT
TTAGCTAAAA GTTATGTACG CGATATTCCT ACCCAAGCGT TAGTCTACAT TCGAAGCTTT
ACCCATAAAC TCGCCGCTCA ATTAGCGGTT CAGCATGGAG TAACGTTTAC CTCAGCAAAC
TTATATGATC GTATTGAGCA GCTGAATCAG CGACGTGTTA TTGATGTTGC CGCAGTGCGG
GCGTTACACC GATTACGCAG TGATGGTAAT CGCGGCGCAC ATCCTGAAAA ATATCATTTA
ACTCAAACTC AGCTTGTTAA CATCGCGGAA AAGTCGATCC ATCAAATTCT GCAGGTAATT
GAAAAACTAT ATCCCTCTCT GCATCCAGGT GTTGCTCCGC ATTATCAATT TGAAGCATTT
GATTCATTTG CTGGCCGCGA TTTATGTTAT CGCGCAGTGA TGAAAAATGA TCCTGAAGCA
CAGTATTTAG TGGGGATGTC TCTTAAAGCC AAAGGATTAA TGCTACAAGA GCAAGAGCGC
GCGTTGGCAC AAACCACTGA CGATTCACTC TTAGCAAGTT CAAATTCAAG TTCAGCATCA
TCAAGCTCAA CATCCTCAAG TTCAAATTCA GCTGAATCAA ACACTCCAAG CCTAATATCA
ACCACGGTTG AACAAACGTC AGCGGATGTA TTTGCCCAAG CAGCACATTG GTTTCATATT
GCATCAGCTC ATCATCAAGC GGCATTGTTT GAGCATGGTG TGAGCTTATT GCACGGCTAT
AGTGGTGCGG AAAATCCTGC GACGGGCGAG GCGTTTATTG CGCAAGCTGC AGCACAAGGT
ATTGTTAATG CGCAGGCCTT GTTAGGTTTC TTTTATCTGG TGGGCAGTGA TCAATTTGAA
GTGGATATTA ATCAAGCCGA AACATTGCTG ACATTAGCCG CTAATGCAGA AGATGCTGAA
GCAATGTCAA ACCTTGGGGT GCTGTTTTAT CAAAACCAAC AATTTGAACA AGCTTACTTA
TGGATAAATA AAGCAGCGCA AACCGGTTAC CCGCATGCAC AATATCATTT GGCACTGATG
CTTGAACAAG GTGAAGGATG CCAAATTGAT CTCGCTACGA GCCAACAATG GATGCAAGAA
GCCGCCGAAC AAGGTCAGTT GGATGCGATG TTACGTTGCA GCAGTGATAT CTTGCACGAT
GATGACGCTA GCCAAGAGCA ACTTAATATT GCTGAACACT ATTTGCATGA AGTGATTAAA
TACGGCCGTA ATGTCACCGC GATGATTGAA CTGAGTGTCG CCTTAGCCGA CGGGATTTTA
GGCCGTATCG ATGTGGTACA AGCAGCATAT TTACTACAAC AAGCTAATTT GCACGCCAAC
GAGATTCAGC GCCAGGTCAT CGAGCCGCTT TGGCAGTCGT TACAGATGCA AATTGACAGT
GTGATTGCGC TTAATCCAAC GGAAGATGAG TTAGCTACCT TGCAACAGGC AAAGTGCTTA
CTCGCGTAA
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| Protein sequence | MLNDIEFING FSTELSDDYR LAKSYVRDIP TQALVYIRSF THKLAAQLAV QHGVTFTSAN
LYDRIEQLNQ RRVIDVAAVR ALHRLRSDGN RGAHPEKYHL TQTQLVNIAE KSIHQILQVI
EKLYPSLHPG VAPHYQFEAF DSFAGRDLCY RAVMKNDPEA QYLVGMSLKA KGLMLQEQER
ALAQTTDDSL LASSNSSSAS SSSTSSSSNS AESNTPSLIS TTVEQTSADV FAQAAHWFHI
ASAHHQAALF EHGVSLLHGY SGAENPATGE AFIAQAAAQG IVNAQALLGF FYLVGSDQFE
VDINQAETLL TLAANAEDAE AMSNLGVLFY QNQQFEQAYL WINKAAQTGY PHAQYHLALM
LEQGEGCQID LATSQQWMQE AAEQGQLDAM LRCSSDILHD DDASQEQLNI AEHYLHEVIK
YGRNVTAMIE LSVALADGIL GRIDVVQAAY LLQQANLHAN EIQRQVIEPL WQSLQMQIDS
VIALNPTEDE LATLQQAKCL LA
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