| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0282 |
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| Symbol | |
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| ID | 4278557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 311347 |
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| End bp | 313086 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133036 |
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| Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase |
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| Protein accession | YP_748983 |
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| Protein GI | 114561470 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAC AGACCAGCGC CGATATGAAT TTGTTATGGG GTCAATTGAT CTTGGAAGAG
CTTGCACGCT TAGGGGTTAA GCATGTGTGT ATGGCACCAG GTTCTCGCTC AACTCCGCTA
ACATTGGCCG CTGCTAGTCA AACCCAGCTC ACTCGTCATA TTCATTTTGA CGAGCGTGGT
TTAGGGTTTA TGGCCCTTGG ACTGGCAAAA GCCAGCAATG CGCCAGTCGC CATCATTACC
ACTTCAGGCA CCGCCGTGGC CAATCTTTAT CCGGCCATTG TTGAGGCGTG GCTAACCCAT
GTGCCACTGA TTATTCTATC TGGTGACAGA CCACCAGAGC TGATTGATTG TGGCGCGAAT
CAAGCGATTA TTCAGCCCGC TATTTTTGCT CAATATGCTA AGCAAGTTAA TTTACCAACG
CCTGATCTTG GTTATCCGGC TAATGCATTA TTGAGTACTA TCGATCATGC TTTAGCTAAT
CAACATCAGC CGGTACACAT AAACTGCATG TACCGTGAGC CGCTATACCC TACAGAATTG
GTGACATTAG CCCATGTAAA GAAAACGGCC AGTGTGACAA CATCAACCTA TCTTGCGCCA
TTAAACCAAT GGTTTGAAAA CACTAAACCA CTGACACGCT ATGCTAGCCT AACGAGTGCT
GAGTTACCGA CTACAGACAC CTTAATGCGC TTTGTTCATG GTAAAGGTGT GATAGTGGTT
GGCACCTTAG CTCCTGAAGA TAATCCACAG CAAATCGTCG CGTTAGCGCA AAAACTTGGC
TGGCCAGTAT TGGTTGATGC ACAATCACAG TTGCGTCAGC ATCCAGGTGT AATCGGCCAC
GTTGACCAGT TATTATTAAA CCCGAAAGCG AACAAACAAC TCGAACAAGC TGAGCGGATA
TTAGTCTTTG GTGGTCGTTT CATTTCCAAA CGATTACTTC AATATATTGC CCAACAATCC
TGGCATAGCT ACTGGCATGT CGTTAAACAC GGGGATCGTT TAGACCCAAC CCATCAGTCT
AAAGAGTTTT ATCAAGCAAG TGTTCAAGCG GTATGCCAAT TACCTTGGCC GCGATCATCA
CAAGCCAACT GGGCATTACA GTTATTACCG TTAAATGAGT CATTAGAGTC GCTGTTTAAG
CAGCAAATCG ACAATACAAC CTTTGGTGAA GCCCAAGTTG TGCGCGCCAT AGCATTGGCT
CAATCAGATC AACATATACT GTTTATCGGT AATAGTTTAC CTATTAGGCT CTACGATATG
TATGCGCCAA TTGCGACCAA CACACCGGCA ATTTATACCA ACCGAGGGGC ATCGGGCATC
GATGGATTAA TTGCAACCGC TTGTGGCGTA GCCGCAGATA AAAATGCACC TACAACCCTA
GTGATGGGCG ACCTATCCTG TTTGCATGAT TTCAATTCTC TGGCACTGCT AAAACAAATG
ACTCAACCAT TTGTGCTAGT TATTATTAAC AATGACGGCG GTAACATTTT TAATTTGTTG
CCTGTACCCA ATGAAAGCCT ACGCAATGAC TTTTATCGAT TAAGCCACGG TTTAGAGTTT
GGCTATGGCG CCGCCATGTT TGGTTTGGCC TATCGCCAAG CAGATGATAT TGAGTCGTTT
AATCAGGCCT ATCAAGAAGC CTTTGAGTTT AATTGTGCCT CAGTGATTGA AGTTAATGTC
AGCCCGACTC AAGCCAGCGA TCAAATAACA CAAATCAGTC AATGGGTGAA ACAACACTAA
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| Protein sequence | MQQQTSADMN LLWGQLILEE LARLGVKHVC MAPGSRSTPL TLAAASQTQL TRHIHFDERG
LGFMALGLAK ASNAPVAIIT TSGTAVANLY PAIVEAWLTH VPLIILSGDR PPELIDCGAN
QAIIQPAIFA QYAKQVNLPT PDLGYPANAL LSTIDHALAN QHQPVHINCM YREPLYPTEL
VTLAHVKKTA SVTTSTYLAP LNQWFENTKP LTRYASLTSA ELPTTDTLMR FVHGKGVIVV
GTLAPEDNPQ QIVALAQKLG WPVLVDAQSQ LRQHPGVIGH VDQLLLNPKA NKQLEQAERI
LVFGGRFISK RLLQYIAQQS WHSYWHVVKH GDRLDPTHQS KEFYQASVQA VCQLPWPRSS
QANWALQLLP LNESLESLFK QQIDNTTFGE AQVVRAIALA QSDQHILFIG NSLPIRLYDM
YAPIATNTPA IYTNRGASGI DGLIATACGV AADKNAPTTL VMGDLSCLHD FNSLALLKQM
TQPFVLVIIN NDGGNIFNLL PVPNESLRND FYRLSHGLEF GYGAAMFGLA YRQADDIESF
NQAYQEAFEF NCASVIEVNV SPTQASDQIT QISQWVKQH
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