Gene Sfri_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0280 
Symbol 
ID4278083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp309438 
End bp310532 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content41% 
IMG OID638133034 
ProductO-succinylbenzoate synthase 
Protein accessionYP_748981 
Protein GI114561468 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1441] O-succinylbenzoate synthase 
TIGRFAM ID[TIGR01927] o-succinylbenzoic acid (OSB) synthetase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCAG ATAACTCAAC GATAACCAGC TGTACTCTGT ATCAATATCA AATTGAACTG 
AATCCTAGTT TACCAGTAGG TATACAACGA ATCGATATTC GTAAAGGGCT AGTGCTTGCT 
ACCCAACTCA ATAATCAACA AGTGGCTTGG GTTGAAATTG CCCCATTATC AGGCATCGAT 
ATTGATAGCC AACCGATAAC AGGGTTTAGC CAAGAGTCGC TTGATGAGGT GACATCACAA 
CTGCTGCAAG TATTACCGAA TTTTATCGAT CAACCCTTAG TGATTTTAAC CAATATTGCC 
GAGCAGATAT CGCTGCCATC ATTGGCATTT TCATTAAGCT TATTGCATGC AAAACTAACC 
GATAAATTAC CTGTTCGCAT CGAAAACCCA CAGACTCAGT TAGCTGTGGT GCCATTACTT 
TACGATGGAA TGTCAGCACA TGTTATTACT CAAAAGTTAC AGACACTGAC CAGCATCAAC 
AGCGTAAAAA TTAAAGTCGC TCAAACCAGT ATGGAAAGCG ACATCCAATT TATTTATCAA 
GTGTTAGCAA TAGCACCGCA TGTAACATTA CGCTTGGATG CTAATCGTGG TTTTAGCCTT 
GAACAGGCTA TCGACTTTTT AGCGTGTTTA CCAAAACACA AAATTGAATA CATTGAAGAG 
CCATGTATTA ACCCCAGTGA CAATGCCCAA ATATACCGGC AATTGGGAAT AAAATATGCC 
TTAGATGAGT CATTGAATTC ATCTCAATTT GATCTCGATT TAGCATTACA GCAACCCGGT 
TTAGGCGCAT TAATTATCAA ACCCATGTTA TTGGGTTCGC TGGAAAAATT GCAAAACATG 
ATTAGCCAAG CTCATCTAGC TGGTGTGCGT TGTATTTTAA GTTCAAGCTT AGAATCTGAC 
CTCGGTATCA GCGACTTACG CATAGTGAGC CAGGCACTAA CACCAGATGA ACCACCAGGC 
CTTGATACAT TAAGCGCCTT TAGCAAACCC GTGTTGTTAG CAACCTCTGG GTTTTCTCCG 
CGGCTAAATC ATCAAGTATT GAAATTACTG ACTCATATCG GCCAGCCACA AGACTCAGAC 
GAGGCCGGTA TATAA
 
Protein sequence
MSSDNSTITS CTLYQYQIEL NPSLPVGIQR IDIRKGLVLA TQLNNQQVAW VEIAPLSGID 
IDSQPITGFS QESLDEVTSQ LLQVLPNFID QPLVILTNIA EQISLPSLAF SLSLLHAKLT 
DKLPVRIENP QTQLAVVPLL YDGMSAHVIT QKLQTLTSIN SVKIKVAQTS MESDIQFIYQ 
VLAIAPHVTL RLDANRGFSL EQAIDFLACL PKHKIEYIEE PCINPSDNAQ IYRQLGIKYA 
LDESLNSSQF DLDLALQQPG LGALIIKPML LGSLEKLQNM ISQAHLAGVR CILSSSLESD 
LGISDLRIVS QALTPDEPPG LDTLSAFSKP VLLATSGFSP RLNHQVLKLL THIGQPQDSD 
EAGI