| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0272 |
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| Symbol | |
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| ID | 4278075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 301407 |
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| End bp | 301970 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133026 |
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| Product | NapC/NirT cytochrome c domain-containing protein |
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| Protein accession | YP_748973 |
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| Protein GI | 114561460 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTGGC GTGCACTATT TAAACCAAGC GCGAAGTACT CGATTATTGC CCTCATTGTG
GTTGGTGTAA TTGTGGGTGT CGTGGGTTAT TTCGCAACAC AACAAACTTT ACATGCAACA
AGTAGCGATG CTTTTTGTAT GACATGTCAC CGTGACCATT CGTTAAGAGA TGAGGTTATG
GCGTCAGCTC ATGGTGGTGG TAGAGCAGGT GTCACCGTGC AATGTCAAGA TTGTCACTTA
CCACATGGCC CATTTGATTA TTTAGTTAAA AAAATCATTG TTTCTAAAGA CATTATTGGC
TTGATGACCA TTGATGGCTT TATGACGCAA GAATGGTTAG ATGAAAACCG TAAAGAACAA
GCGGACCTAG CCTTAAAATA CTTCCGCAGT AATGATTCTG CTAACTGTCA GCATTGCCAC
ACTCGTATTT ATGAAGATCA GCCTGATACG ATGAAGAAAA TGGCCGTAAG AATGCACAGT
ATGAACTTTA AAAAAGCACC AGAAGACAGA AAGACCTGTG TCGATTGTCA TAAAGGTGTC
GCGCATCCTT ACCCTAAAAA GTAA
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| Protein sequence | MNWRALFKPS AKYSIIALIV VGVIVGVVGY FATQQTLHAT SSDAFCMTCH RDHSLRDEVM
ASAHGGGRAG VTVQCQDCHL PHGPFDYLVK KIIVSKDIIG LMTIDGFMTQ EWLDENRKEQ
ADLALKYFRS NDSANCQHCH TRIYEDQPDT MKKMAVRMHS MNFKKAPEDR KTCVDCHKGV
AHPYPKK
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