Gene Sfri_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0270 
Symbol 
ID4278073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp299214 
End bp299939 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content39% 
IMG OID638133024 
Producthypothetical protein 
Protein accessionYP_748971 
Protein GI114561458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTGGG TCAGAAAGCT GCATAAATGG GCATCAGTCA TTGTAGGGAT TCAGTTACTC 
CTATGGTTAA TTAGCGGGCT GTATTTTAAT CTTATGGATC ACGATAAGGC TCAAGGGCTT 
ACTCACCTTA ACGATACTCA CGCTGAAGTG GCAATAGAGA CTCATCGTTT ACTTGAACCT 
GGTACTATTT TGGCCGCCTT TAAGCCTAGC GTATCGCTTA ATATCATTAC TTTATTAGAT 
AAACCTTACT ACTTATTAAT CCATGAAAAG GGTTTATACA ATCATCTTAA CAATGACTAC 
AGCTTGGTTG ATGCTTATGA CGGTAACCAA GTAATAATTG ATATCACAAT GGCACAACAG 
TTGGCCAAAG CATCTTATTC TGGAGAGGCT ACAATAAGTT CAACTCTCTT ACTCACTCCG 
CCGTTAGACG ACTTTCCTAA ACAGCACAAT GACACTTGGC AGATAAACTT TGCTGATAAC 
ATTGGCACCA GCGTTTATAT TGAAGCGCAG TCGGGTCGAC TTGTCGGCCA CAGTGATGAG 
CATACACGTT TAGCCGATAT ATTTTTTATG CTGCACTTTA TGGATTACAC CAGTGAAGGC 
AGTTTTAATA ACATCCCTAT CATGATCTTT GCATTTATCA CTTTATGGTT AACTTTTAGT 
GGATTAATTT GGGTGATTGA TATGCTTAAG CGCAACAGGT ATCGGCCCAA ACTAAAGCGC 
AAATAA
 
Protein sequence
MFWVRKLHKW ASVIVGIQLL LWLISGLYFN LMDHDKAQGL THLNDTHAEV AIETHRLLEP 
GTILAAFKPS VSLNIITLLD KPYYLLIHEK GLYNHLNNDY SLVDAYDGNQ VIIDITMAQQ 
LAKASYSGEA TISSTLLLTP PLDDFPKQHN DTWQINFADN IGTSVYIEAQ SGRLVGHSDE 
HTRLADIFFM LHFMDYTSEG SFNNIPIMIF AFITLWLTFS GLIWVIDMLK RNRYRPKLKR 
K